KEGG   Lathyrus oleraceus (garden pea): 127117686
Entry
127117686         CDS       T08598                                 
Name
(RefSeq) protein transport protein SEC13 homolog B-like
  KO
K14004  protein transport protein SEC13
Organism
psat  Lathyrus oleraceus (garden pea)
Pathway
psat03013  Nucleocytoplasmic transport
psat04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:psat00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    127117686
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    127117686
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psat03019]
    127117686
   04131 Membrane trafficking [BR:psat04131]
    127117686
Messenger RNA biogenesis [BR:psat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     127117686
Membrane trafficking [BR:psat04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    127117686
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    127117686
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    127117686
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR35_TULP_N Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_WDR3_2nd WDR55 Beta-prop_Vps41 ANAPC4_WD40 WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_SCAP DSE1_N WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_NOL10_N WD40_2
Other DBs
NCBI-GeneID: 127117686
NCBI-ProteinID: XP_050903732
LinkDB
Position
2:complement(15678098..15679834)
AA seq 301 aa
MPGQKVETGHQDTVHDVAMDHYGKRLATASSDHTIKIIGVSNSASQHLATLTGHQGPVWQ
VTWAHPKFGSLLASCSFDGRVIVWKEGNQNEWIQAHVFDEHKSSVNSVAWAPHELGLCLA
CGSSDGNISVFTARADGGWDSSRIDQAHPVGVTSVSWAPSMAPGALVGSGLLDPVQKLCS
GGCDSTVKVWKLNNGHWKMDCFPALQKHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIW
TVAKEGDQWDGKILKDFNTPVWRVSWSLTGNILAVADGGNNVTLWKEAVDGEWQQVTTVE
P
NT seq 906 nt   +upstreamnt  +downstreamnt
atgcctggtcaaaaggttgaaacgggtcatcaagacacggttcatgatgttgcgatggat
cattatggtaaacggttggctacggcttcgtcagatcacacaattaagataattggagtg
agcaactccgcctcacagcatttagcaactcttactggtcatcaaggacctgtttggcag
gtaacatgggctcatcctaaattcggttctctacttgcctcgtgctcttttgatgggcga
gtaattgtatggaaggaaggtaaccaaaacgaatggatccaagctcatgtatttgatgag
cataagtcgtctgtgaactcggttgcttgggcaccgcatgagttgggtctttgcttggct
tgtggttcgtcggatgggaatatttcggttttcactgcacgagcagatggtggttgggac
agttcaaggattgaccaagctcaccctgttggtgtcacttctgtgtcgtgggctccttcc
atggcacctggcgctcttgttggttctggtttgcttgaccctgtacagaagctttgctcc
ggtggttgtgatagtaccgtgaaggtgtggaagcttaacaatgggcattggaagatggac
tgcttccctgctcttcagaagcatactgattgggttagagatgtagcttgggcaccgaat
ttgggacttccaaagtctactattgcaagtgcttctcaggatgggaaggtgattatatgg
actgtggccaaggagggggatcaatgggatggcaagattttgaaagatttcaatacccct
gtttggagagtttcgtggtcattaactggaaacatattggctgtggctgatgggggcaat
aatgttacattatggaaggaagccgtagatggagagtggcaacaggtgacaactgtggaa
ccatag

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