Lathyrus oleraceus (garden pea): 127117880
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Entry
127117880 CDS
T08598
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
psat
Lathyrus oleraceus (garden pea)
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psat04131
]
127117880
04121 Ubiquitin system [BR:
psat04121
]
127117880
Enzymes [BR:
psat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127117880
Membrane trafficking [BR:
psat04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
127117880
Ubiquitin system [BR:
psat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127117880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
CxC4
zf-Nse
zf-RING_16
DUF7410
Motif
Other DBs
NCBI-GeneID:
127117880
NCBI-ProteinID:
XP_050903960
LinkDB
All DBs
Position
2:complement(32591755..32593962)
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AA seq
332 aa
AA seq
DB search
MSSGATHWCYECSRPIVLEGRGIVCPYCDDGFVQELDEMRGVAPQNTLPSRSGEFHQMPD
LFDAIHAFVGNRGSENRFGLMDAVDNFMRHRMAGMHPNFDVRGRSGSSVPVPEQSWGVYS
SGPFLVFHGQVPGLNLPNGSSRGGSRRGDFGDYFMGSGLEELIEQLTMNDRRGPAPAARS
SIDAMPTIRITQAHLRSDSHCPVCKEKFELGSEAREMPCDHIYHSDCIIPWLVQHNSCPV
CRVELPPQGQVSSRGGGGGRSWGGRNGGNNGGNGNSRESDRQNNGRRNPFSFLWPFRSSS
SSSNNNQYSEGSTSSTNADQNNGTSYHGWHDN
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtggagcaacgcattggtgttatgaatgcagtcggccaattgtgcttgaaggg
agaggcattgtctgcccttactgtgatgacggatttgttcaagaacttgatgagatgcga
ggcgttgcacctcaaaacacccttccgtcacgctcgggagagtttcatcaaatgcctgac
ttatttgatgctattcatgcttttgtggggaacagaggttccgaaaacaggtttgggctt
atggatgctgttgataatttcatgcggcataggatggctggaatgcacccgaactttgat
gttagagggaggtccggttcgtctgtcccggttcctgaacagagttggggcgtttatagt
tccggtccttttttagtatttcacggtcaagttcctggattaaacttgccgaatggaagc
tcgagaggaggttccaggcgcggtgattttggtgactactttatgggttctggactggaa
gaacttatcgaacaactcaccatgaatgatcggcgtggtccagccccagctgcacgatca
tcaattgatgcaatgccgactattaggatcacacaggcgcatcttcgctcggactcacat
tgtccagtctgtaaagaaaaattcgaacttggttctgaagcaagagagatgccatgcgac
catatttaccattctgactgtattattccttggttggttcaacataactcgtgtcctgtt
tgtcgcgtcgagctgccaccacaaggacaagttagttctcgtggtggtggtggtggtcga
agttggggaggaaggaatggtggcaacaacggtggaaatgggaatagcagagagagtgac
cgtcagaacaatggaaggagaaatccgttttcgtttctgtggccattccgttcttcttcg
tctagttcaaacaataatcaatattctgagggaagcacttcttcaaccaatgctgaccag
aataacggaactagttaccatggatggcacgataactaa
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