Pisum sativum (pea): 127118013
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Entry
127118013 CDS
T08598
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
psat
Pisum sativum (pea)
Pathway
psat04120
Ubiquitin mediated proteolysis
psat04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127118013
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
127118013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psat04121
]
127118013
Enzymes [BR:
psat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127118013
Ubiquitin system [BR:
psat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127118013
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
127118013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_HPS5
zf-C3HC4_2
Beta-prop_DCAF4
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
zf-C3HC4
WD40_like
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
zf-C3HC4_3
zf-RING_2
zf-RING_UBOX
Beta-prop_WDR35_TULP_N
zf-C3HC4_4
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF12
U-box
Beta-prop_SCAP
zf-RING_5
Beta-prop_IFT122_2nd
zf-Nse
YbfN
DUF1664
Motif
Other DBs
NCBI-GeneID:
127118013
NCBI-ProteinID:
XP_050904102
LinkDB
All DBs
Position
2:46291826..46302159
Genome browser
AA seq
672 aa
AA seq
DB search
MEEHSVGPLVPAVVKPEPSKNFSTDTTAAGDVSPVPTMSDLDKDFLCPICMQIIKDAFLT
ACGHSFCYMCIITHLRNKSDCPCCGHYLTNSNLFPNFLLDKLLKKTSDRQISKTASPVEH
FRQAVQKGCEVTMKELDTLLLLLTEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEV
QTDLQFIKEDIGAVEKHRMDLYRARDRYSVKLRMLDDSGGRKSRHSSMDLNSSGLASSPL
NLRGGLSSGSHTKKNDGKSQISSHGHGIQRRDPITGSDSQYINQSGLALVRKKRVHTQFN
DLQECYLQKRRQAADKPHGQQERDTNFISREGYSCGLDDFQSVLTTFTRYSRLRVIAEIR
HGDIFHSANIVSSIEFDRDDDLFATAGVSRRIKVFDFSAVVNEPTDAHCPVVEMTTRSKL
SCLSWNKYAKNQIASSDYEGIVTVWDVTTRKSLMEYEEHEKRAWSVDFSRTDPSMLVSGS
DDCKVKVWCTNQEASVLNIDMKANICCVKYNPGSGNYIAVGSADHHIHYYDLRNISRPVH
VFTGHKKAVSYVKFLSNDELASASTDSTLRLWDVKQNLPVRTFRGHANEKNFVGLTVSSE
YIACGSETNEVFVYHKEISKPLTWHRFGTLDMEDAEDEAGSYFISAVCWKSDRPTILTAN
SQGTIKVLVLAA
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggaagagcactcagtaggacctctagtccctgcagtagtgaaaccagaaccttccaaa
aacttctccaccgacaccaccgccgccggcgacgtttctccggttcccaccatgtctgac
ctagataaggacttcctctgcccgatttgcatgcagatcatcaaagacgcgtttctcaca
gcctgtggtcatagcttctgctacatgtgtatcatcactcatctccgtaacaaaagcgat
tgtccttgctgtggtcattacctcaccaacagtaatttgttcccgaacttcctgctcgat
aagctactaaaaaagacatcagatcgtcaaatatcaaagacggcttctcctgtggagcat
ttccggcaggcagtacaaaagggctgtgaagtgacaatgaaggagctcgacacccttttg
ttactccttactgagaagaaaagaaaaatggaacaagaagaagctgagagaaatatgcaa
atattgttagatttcttgcattgcctacgcaagcaaaaagttgatgagttgaaggaggtg
caaactgatctccagttcataaaggaggacattggtgctgtggagaaacatagaatggat
ttgtatcgtgctcgagacaggtactctgtgaaattgcggatgcttgacgattctggtgga
agaaaatcacggcattcatcaatggacttgaatagcagtggcctcgcatctagtccttta
aatcttcgaggagggttatcttcagggagccatactaagaaaaatgatggaaagtcacaa
atcagctctcatgggcatggaattcagagaagagatcccatcactggatcagattcacag
tatataaatcaatcgggtcttgctctagttagaaagaagagggtgcatacacagttcaat
gacctacaagaatgttatctacaaaaacgacggcaagcagcagataagccacatggccaa
caggaaagggatacaaatttcataagtcgagaaggttatagctgtggtcttgatgatttt
cagtcagtcttgacaactttcacacgctacagccgattgagagtcattgcagaaataaga
cacggggatatatttcattcagccaacattgtttcaagcatagagtttgaccgtgatgat
gatttgtttgctactgctggagtttcccgacgtatcaaagtttttgatttttctgcggtc
gtgaatgaacccacagatgctcattgtcctgttgtggagatgactacacgttcaaaactt
agttgcttgagttggaacaaatatgctaagaaccaaatagctagtagtgattatgaagga
attgtaactgtttgggacgtgaccactcgaaagagtttaatggaatatgaagagcatgaa
aagcgtgcatggagtgttgatttttcaagaacggacccctctatgcttgtatctggtagt
gatgattgtaaggtcaaagtttggtgcacaaatcaggaggccagtgttctaaatatagac
atgaaagcaaacatatgctgcgtgaagtataatcctggatctgggaattacatcgcagtt
gggtctgcagaccatcacatccattattatgatttgagaaatattagccggccagtccat
gttttcactgggcacaagaaggctgtttcatacgtgaaatttttgtccaacgatgaactt
gcatcggcatcaacagatagtacactgcggttatgggatgtaaagcaaaacttaccagtt
cgtaccttcagaggccacgcaaatgagaaaaactttgttggccttacagttagcagtgag
tacattgcatgtggcagtgaaacaaatgaagtatttgtctaccacaaggaaatttctaag
cctctgacatggcatagatttggtaccttagacatggaagacgcggaggatgaggctgga
tcttacttcatcagtgctgtatgctggaagagtgatcgccccaccatactaactgcaaat
agtcaaggcaccatcaaagtgctggtgcttgctgcttaa
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