Pisum sativum (pea): 127118352
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Entry
127118352 CDS
T08598
Name
(RefSeq) pre-mRNA splicing factor SR-like 1 isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
psat
Pisum sativum (pea)
Pathway
psat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127118352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psat03041
]
127118352
Spliceosome [BR:
psat03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
127118352
Complex C
U4/U6.U5 tri-SnRNP related factors
127118352
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
127118352
NCBI-ProteinID:
XP_050904489
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Position
2:complement(110980839..110986464)
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AA seq
436 aa
AA seq
DB search
MELQTSGRPIESLLEKVLCMNIMSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR
GPSTAFCLLFKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYYADPKTLWNWFEPYAK
DDEEFSPGSNGRMTTMGVYIRDLLLGQYYFDTLFPRIPVPVMRQVVANLEKLKLPTTHCG
TTGETTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPIRRTVPPHEKNGTDDVR
RSPSNRRSQSREYPERDRDRERSRSRDRERDRDRERDRERDRDRYYDRNRNKDRDVERYR
DRDRDRDHERERTRRERDRERSYDYDKRSKYAERESSRDYDNSIGNGSRHYRSRSRSRSR
SRSRSQSQVGTTRYESRSSPPRDGSKKTSASSNLAKLKDLYGDLGDSKGDANMERIPRRN
NGGEEVIRLGGSSWKY
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggagttacagacttctggcaggccaattgagtccttgctagagaaagtcctttgcatg
aacatcatgtcatctgattacttcaaagagctttatcgattgaaaacataccatgaagtt
attgatgagatatacaatcaagttgatcatgtggagccttggatgactgggaactgtcgg
ggtccttcaacagctttctgtcttctttttaagtttttcactatgaagcttactgtcaag
cagatgcacggtctactgaaacatccggactccccttacataagagcggttggatttctc
tatctgagatattatgctgatccaaagactctgtggaactggtttgagccatatgcaaaa
gatgatgaggaattttctcctggatctaatggacggatgactacgatgggtgtatatatc
cgtgatttgctccttggacagtactacttcgacacactttttccccgcattccagttcct
gtaatgcgtcaggttgtggcaaatcttgaaaagttgaagctccctactacacactgtggt
acaacaggggaaaccacccgtcatggttctgatgacactgcccgtagaccaccttctgtg
aaagctgctctttcagtctcttttggtcagcgtgcgccacatcgagcctccacaagggat
tcttcacccattcgtcgtacagtacctcctcatgaaaaaaatggcactgatgacgtaaga
cgatctcccagtaatcgtcgcagtcagagccgtgaatatcctgaaagggatagagacagg
gagcggtcacgctccagggaccgggaaagagaccgggaccgtgaaagggacagggaacgt
gacagggacagatattatgaccgaaataggaacaaggaccgagatgttgaaagatacagg
gatcgggaccgagatagagatcatgagagggaaagaaccaggagggagagggacagagag
aggagttatgattatgataagaggtctaagtacgcagagagagaaagtagccgggattat
gacaacagcattggcaatggtagtaggcactatcgtagtaggagtcgaagtagaagtagg
agcaggagccgaagtcagagtcaagttggcaccacacgatatgaatcgcgatctagtcca
ccgagagatggaagtaagaagacttctgcatcaagtaatctagctaaacttaaagatttg
tatggtgatttaggtgatagtaaaggagatgccaacatggaaagaattcctagaaggaat
aatggcggcgaagaggttattagacttggtggctcttcttggaagtattga
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