Pisum sativum (pea): 127120895
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Entry
127120895 CDS
T08598
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
psat
Pisum sativum (pea)
Pathway
psat04120
Ubiquitin mediated proteolysis
psat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127120895
04120 Ubiquitin mediated proteolysis
127120895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psat04121
]
127120895
Enzymes [BR:
psat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127120895
Ubiquitin system [BR:
psat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127120895
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf-RING_11
zf-RING_5
MIX23
Motif
Other DBs
NCBI-GeneID:
127120895
NCBI-ProteinID:
XP_050907440
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Position
2:complement(490251851..490256001)
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AA seq
516 aa
AA seq
DB search
MMRLKTYAGLSLIATLAIAYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCVLWQL
TKKIFLGSLREAEVDRLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLA
QKRVEYIETTPTVTMLSHIRIVSFMGFLLLIDSLFLYNSLKHLIDTWQASVSLFFAFEYM
ILATTTVSIFVKYIFYVSDMLMEGQWEKKPVFTFYLELIKDLLHLSMYLCFFFVIFVNYG
IPLHLIRELYETFRNFKVRIADYIRYRKITSNMNDRFPDATPEELDASDATCIICREEMT
AAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPAENGTSVAGGQQGSQSNGHQQGQTE
LDSGGATDSVSRHQARLQAAAAAASIYEKSYVYPSVTYSVRSIDLNGEQASSEQAQQKFH
NPGGPRDVPFPPMGQSLPSQPYAAPSNYGERIGNDRNSRKVVFEAHKQMFQEQIEILQEH
IQKLETTYAEGSVDGGMPSSASRDKLSVSSENQEGA
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggttgaagacatatgctggtcttagtttgattgcaactttggctattgcatat
catgcatttaacagtagagggcaattttatcccgcgatggtgtatctttcgacttccaag
ataagtttggtgcttcttctcaatatgggtttggttatcatgtgtgttttgtggcaattg
acaaagaagatattcttgggttcacttcgagaggcggaggttgataggcttaatgagcaa
tcgtggagggaggttatggagattctgtttgcgattactatttttaggcaggatttttcg
gttacgttccttgccatggttacggctttgttgttaattaaggctttgcattggttggct
cagaagagagtagagtatattgagactactcctaccgtgaccatgttgtctcatattcga
attgtatcttttatgggcttccttcttcttatagatagccttttcttatataattctttg
aagcatttgatagatacgtggcaggcttctgtttctctgttctttgctttcgagtacatg
atactggcaacaacaacagtgtcgatttttgtaaaatatattttctatgtcagtgacatg
cttatggagggacagtgggaaaagaaaccagtcttcacgttttacctagaacttattaag
gacttgctgcacttgtccatgtatctgtgcttcttctttgttatttttgtaaactacggt
attcccttgcacctaatacgggagttgtacgagacatttaggaacttcaaagttcgcatt
gcagattacattagatatcgtaagatcacttcaaatatgaatgatcgctttccagatgca
acccccgaagagcttgatgctagtgatgcaacatgtattatctgtcgtgaagagatgact
gctgctaagaaacttatatgtggacacctttttcatgtccattgcctccgatcatggtta
gagcgacaacatacttgcccaacctgcagagccttggttgtaccagccgaaaatggaaca
tctgttgctgggggtcagcaaggatcacaatcaaatggtcatcaacaaggtcaaaccgag
cttgacagtgggggagcaactgatagtgtgagtcgccatcaagctagactccaagcagct
gctgctgcagcttcaatatatgagaagtcttatgtttatccctcggtaacttattctgta
cgcagtattgatcttaatggagaacaagcttcaagtgagcaagcacaacagaagtttcat
aaccctggtgggccaagagatgtaccctttcctccgatgggacaatctcttccttctcaa
ccatacgcggcgccttccaattatggagagaggattggaaatgatcgaaattcccgaaag
gttgtgtttgaagctcataaacaaatgtttcaagaacagattgagattctgcaagaacat
atacagaaactggagaccacctatgctgaaggaagtgtagatggtggcatgccatcatca
gcaagcagagacaagcttagcgtttcctcggagaatcaagagggagcataa
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