Lathyrus oleraceus (garden pea): 127121028
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Entry
127121028 CDS
T08598
Name
(RefSeq) DNA-directed RNA polymerase subunit alpha-like
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
127121028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psat03021
]
127121028
03400 DNA repair and recombination proteins [BR:
psat03400
]
127121028
Enzymes [BR:
psat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
127121028
Transcription machinery [BR:
psat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
127121028
DNA repair and recombination proteins [BR:
psat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
127121028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S11
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-GeneID:
127121028
NCBI-ProteinID:
XP_050907606
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All DBs
Position
2:complement(132267541..132270938)
Genome browser
AA seq
468 aa
AA seq
DB search
MAKSIPKIGSRKTGRIGSRKHPRKIPKGVIYIQASFNNTIVTVTDVRGRVISWSSAGSCG
FKGTRRGTPFAAQTAAGNAIQTVVEQGMQRAEVRIKGPGLGRDAALRAIYRSGILLKVIR
DVTPLPHNGCRAPKKRQKLKVSTQTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGI
TMRRILLGEIEGTCITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTREAS
ICFKGPGYVTAQDIILPPSVEVIDNTQHIANLTEPINLCIELQIERKRGYRIKTLNNIQD
GSYTIDAVFMPVRNANHSIHSYVNGNQKQEILFLEIWTNGSLTPKEALYEASRNLIDLFI
PFLHAEEENLNFENNQHKMTLPLFTFHDHDRFVKDKLRKNQKEITLKSIFIDQLELPPRI
YNCLKKSNIHTVLELLNKSQEDLMKIEHFRVEDLKFILNILQIENHFV
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatctataccaaaaattggttcacggaaaactggacgtattggttcgcgtaag
catcctcgtaaaataccaaagggggttatttatattcaagctagtttcaacaataccatt
gtgactgttacagatgtacgaggtcgggtgatttcttggtcctccgccggttcatgtgga
ttcaagggtacacgaagggggacaccatttgccgctcaaaccgcagcgggaaatgctatt
caaacagtagtcgagcaaggcatgcaacgagcagaagtaaggataaagggtccgggtcta
ggaagagatgcggcattaagagctatttatagaagtgggatactattaaaggttatacgg
gatgtaacccctctgccacataatggatgtcgggctcctaaaaaaagacaaaaactaaaa
gtatcgactcagacactacagtggaagtgtgttgaatcaagggtagacagtaagcgtctt
tattatggacgctttattctgtctccacttatgaaaggtcaagcagatacaataggcatt
acaatgcgaagaattttgctcggagaaatagagggaacatgtatcacacgtgcaaaatct
gagaaaataccacatgaatattctaccatagtaggtattcaagaatcaatacatgaaatt
ttaatgaatttgaaagaaattgtattgagaagtaatctgtatggaactcgggaggcgtct
atttgtttcaaaggtcctggatatgtaactgctcaagacatcattttaccaccttcggtg
gaagtcattgataatacacaacatatagctaacctaacagaacctattaatttgtgtatt
gaattacaaattgagagaaagcggggatatcgtataaaaacactaaacaacattcaagat
ggaagttatactatagatgctgtattcatgcctgttagaaatgcaaatcatagtatccat
tcttatgtgaatggaaatcaaaaacaagagatactatttctggaaatatggacaaatgga
agtttaactcctaaggaagcactttatgaagcctcccggaatttgattgatttatttatt
ccttttttacatgcagaagaagaaaacttaaattttgaaaacaatcaacacaaaatgact
ttgcccctttttacttttcatgatcatgatagattcgttaaggataaactaaggaaaaat
caaaaagaaattacattgaaatccatttttattgaccaattagaattgcctccccggatc
tataattgtcttaaaaagtccaatatacatacagtattggaacttttgaataagagtcaa
gaagaccttatgaaaattgaacattttcgagtagaagatttaaaatttatattaaacatt
ttacaaatcgaaaatcattttgtataa
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