Lathyrus oleraceus (garden pea): 127121345
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Entry
127121345 CDS
T08598
Name
(RefSeq) sister chromatid cohesion protein SCC2 isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
psat
Lathyrus oleraceus (garden pea)
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psat03036
]
127121345
Chromosome and associated proteins [BR:
psat03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
127121345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PHD
Cnd1
PHD_2
zf-RING_15
COP9_hel_rpt
Motif
Other DBs
NCBI-GeneID:
127121345
NCBI-ProteinID:
XP_050907823
LinkDB
All DBs
Position
1:123277853..123302411
Genome browser
AA seq
1801 aa
AA seq
DB search
MTSSTTSDAAAAAAKFAGHRGTSMANTVHSEVASCLPLPSLPVFYGASDQDLLLFDSPMQ
LNRDAILSKSSKIAEMLRHTDVSYLNLRDDAKVVQYNYVEPLELHDEVLRCNPEAFECGT
AGPVKEKISGSALPEKKLSESSFSDTSQTQKDYNSTNDISTLSSKKSKVKKKGDNEISIE
PDSAVLQDAIIGRFREFLEDLCSKAELNSDDLDEAVEWLPLPLSDLRLLVNEIMSMCEKN
LLHLVPVEFLVRLLKVLDHQIHRAEGLSIEDSDNSNSELVSSLLVALESIHAALAVMAHT
DMPKQIYKEEVIERILEFSRHQIMDVMCACDPSYRALYRPSENTALEVDDDDDDDDADFG
SASKKRRTSSKTVKLKKPSSSRFSSTVNVILQKLCSVLGLLKDLLLIERLSDSCILQLIK
TSITTFLVDNIQLLQLKAISLLSAIFYLYTQHRTYVLDEMLHLLWKLPHSKRALRNYHIR
EEEQRQIQMITALLIQLIHCSANLPDTLRQASSSNSVLEISVDASYPAKCRDAVTEACSY
FWTRVLQRLASVKSQDASELKSIMENLVTDLLTTLNLPEYPASASILEVLCAILIQNAGT
NSKDFAARSMAIDVLGTIAARLKRDAVICSREKFWVLQDLLSKDAAAQNYPKDTCCVCLD
GRAESLFPCSACSRLFHAECLDIEENEVLNQNWYCHMCICSKQLLVLQSYCNSQRKNDVK
KNRKVSKDDSTFSNLEIVQQLLLNYLQDVTSADDLHLFIGWFYLGSWYKNDPKCQQKPIY
YFARMKSRTIIRDSATVSSMLERDSIKKITLALGQKSSFCRGFDKIFHTLLVSMKENTPI
IRAKALRAVSIIVEADPEVLGDKLVQLSVEGRFCDTAISVREAALELVGRHIASHPDVGF
KYFEKIAERIKDTGLSVRKRAIKIIRDMCISSANFSGFTRACTEMISRVIDDESSIQDLV
CKTFHEFWFEEPSASQTQVFEDGSTVPLEVAKKTEQIVEMLKRLPNNQLLVTIIKRNLTL
DFLPQSAKAIGVNPSSLVTVHKRCELMCKCLLEKILQVDEMNNNEMEKHALPYVLVLHAF
CLVDPTLCAPASNPSQYVITLQPYLKTQVDNSMVAQLLESITFIIDAVLPLLRKLPLSIV
DELEQDLKQMILRRSFLTVVHACIKCLCSMSKIAGKGADVIEHLIQVFFKCLDTQAIVNK
QQVGRSLFCIGLLIRYGNCLLASSGNKLVDVRRSLSLFMKYLAVDDYSLKVRSLQALGYV
LIARPEFMLEHDIGKILEETLSSHADARLKIQALQNMFEYLLDAESKMEAEVDDNVPGHS
VRAGQSVPVAAGAGDTNICGGIVQLYWDNILGRCLDCDEQVRQSALKIVEIVLRQGLVHP
ITCVPYLIALETDPLESNSKLAHHLLMNMNEKYPAFFESRLGDGLQMSFMFMQAICVIPD
ENVNHKTPSKIPVSGKGKPESDSITQSRVGVSRIYKLIRGNRMSRNKFMSSIVRKFDNPK
WNKFVIAFLTYCTEVLALLPFIAPDEPLYLIYAINRVVQVRAGQLEANFKAWCSSLLRSE
GDVTPHGNGMHQQAPNEPIHSTQVMSTDLNGTFQQSVDVQPNLDDMPSVDLNGTNHQLPD
YPLSHNGRSKVKAHAGGYADTFTFSKDDLEKVQAGCLYAIALQLLLKLKRHLKIMYSLDD
ARCQAYSPSEPPKPGEVFSRQSIPFNVGESQFSLPTNPQELIQRYQEFKNALKDDTMDYS
LYTANIKRKRQTPTPRKVQVRKPGPMLGGDSDEEDDEEWAGGMRNINFSGGRRQSLRSSR
Q
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atgacttcttcaaccacttccgatgccgctgcggcggcggcgaaattcgccggccaccgc
ggaactagcatggctaatactgtccattctgaagtcgcctcttgcttgccgttaccatcg
cttccggttttctacggagcttccgatcaagacctactgctcttcgattcaccgatgcag
ttgaaccgtgacgccatcctctcgaagtccagtaagatcgccgagatgctccggcacact
gatgtgtcgtacttgaatttaagagatgatgccaaggttgttcagtataactacgttgag
cctttagaactccatgatgaagttctcaggtgcaatcctgaagcatttgaatgtggtact
gcaggtcctgtcaaggagaagatctctggtagtgcattacctgaaaagaagctctcggaa
tctagtttttctgacacaagtcagactcaaaaagactataattctacaaatgacatttct
acattgtcttctaagaaatcaaaagttaagaagaaaggcgacaatgaaatatctattgaa
cctgattctgctgtgcttcaagatgccataattggaaggtttcgcgagtttttggaagac
ttatgtagcaaggctgaattgaatagtgatgatctagatgaagcagtagaatggttgcca
ttgcctctttcagatcttagattgcttgtaaatgaaatcatgtctatgtgtgagaagaat
cttctgcatttggttcctgtagaattccttgttagactgctaaaggttttagatcatcag
atacatagagcagaaggcctgtcaattgaggattctgacaattccaattcagaactagtt
tcgtctcttttagttgcgttggagtccattcatgctgcactggcggtgatggctcatact
gacatgccaaagcaaatttataaagaagaggtcattgagagaattctggagttttccagg
catcagataatggatgtgatgtgtgcatgtgatccatcataccgtgcgttatacagacct
agtgaaaacactgcacttgaagttgatgatgacgatgacgatgacgatgctgattttggt
tcagcaagcaaaaaacgacgtactagcagcaagactgttaagttaaagaaaccatcatca
agcaggttctctagtactgtgaatgttattcttcagaagttgtgttctgttcttggtcta
ctcaaggatttgttgttaatagagaggttgtcagatagttgcattttacaacttataaaa
acaagcattacaacattcttggttgataacatccagctcttgcaattgaaggcaatcagt
ttactcagtgcgatattctatttatacacacaacatcgcacttatgtgttagatgaaatg
cttcaccttctttggaaattaccgcattcaaaacgagctttaaggaattatcacatacgc
gaggaagagcaaagacagatccagatgattactgctttacttatccaattaattcattgt
agtgctaaccttcctgatactttaagacaagcatcgagtagtaactctgtattggaaatc
tcggttgatgctagttatccagctaaatgccgcgacgcagtaacagaagcctgctcctat
ttttggacccgtgtacttcagcgacttgcaagtgtaaagagtcaggatgcttctgaattg
aaatccataatggagaatcttgttactgatttattgaccactctaaatttacctgaatat
cctgcttcagcttctattctagaggttctatgtgctatactaattcagaatgctgggaca
aattccaaggattttgctgcacgttccatggcaattgatgttcttggcactattgctgca
aggttgaagcgtgatgctgtgatttgtagcagggaaaagttctgggtacttcaagattta
cttagtaaggatgctgctgctcagaattatccaaaagatacatgttgtgtctgtttggat
ggaagggctgaaagtttgttcccatgttccgcctgcagtaggctttttcatgctgaatgc
ctggacattgaagaaaatgaagttctcaatcagaactggtactgtcacatgtgcatctgc
tcaaagcaactgcttgtactgcaatcatattgcaattcccagcgcaagaatgatgtaaaa
aagaatcgtaaagtttcaaaggatgattctacattttctaaccttgaaattgttcaacaa
ttgcttttgaattaccttcaagatgtcacctctgcggatgacctgcatcttttcattggc
tggttttatcttggttcgtggtataaaaatgatccaaaatgtcagcagaagcccatttac
tactttgctaggatgaaatcaagaaccataatacgggattctgctactgtttcttctatg
ctggagcgagattcaatcaagaagattactctagctttaggccaaaaaagttcattttgt
cgagggtttgataagatttttcacacacttttggtaagtatgaaggagaacactccaatt
attagggctaaagctttacgagcagttagtatcattgtagaggctgatccagaggtattg
ggtgataaactagtacaattatctgttgaaggtaggttttgtgacactgcaatatctgtt
agagaagcagcattggaacttgttggtagacatattgcttcccatccagatgtgggtttt
aagtattttgagaagattgcagagagaatcaaagatactggactgagtgttcgaaaacga
gctataaaaattattcgagatatgtgcatctcaagtgccaacttctcggggtttacaaga
gcctgcacagagatgatttcacgtgttattgatgatgaatcgagtatccaggatcttgtt
tgtaaaacatttcatgagttctggtttgaggagccttctgcttcacaaactcaggtcttt
gaagatggtagtactgttccactagaggtggctaagaaaactgagcaaatcgttgaaatg
ctgaagagattgccaaataatcagcttcttgtaactataataaagcgcaacttgactctt
gattttttaccgcaatctgcaaaagcaattggggtcaacccatcgtcccttgtaacagtg
cataagcgttgcgagttgatgtgcaaatgcttgctggagaagattttgcaggtggatgaa
atgaacaataatgaaatggaaaagcatgcactaccatatgtgctagtcttgcatgcattt
tgtcttgtggacccaactctctgtgcaccagcttctaacccttcccagtatgtcattact
ttgcagccatatctgaagactcaggttgacaatagcatggtcgcacagctacttgagagt
ataacatttataattgatgctgtgttgccattgctgcgtaagttacctctcagtattgtg
gatgaacttgaacaagatttgaagcagatgattcttcgacgctctttcttgacagttgtc
catgcttgtatcaaatgcctttgcagtatgagtaagattgctggaaagggggcagatgta
attgagcatcttatccaggtcttcttcaaatgtttggatacccaggcaattgtaaacaaa
cagcaagttgggcgatctctcttctgtatcggcttacttattcgttatggcaactgtttg
ctagcaagctctggtaataaacttgttgatgtcagaaggagcctcagcttgtttatgaag
tatcttgccgtggatgattattctcttaaggttagatcattgcaggcactaggatatgtt
ctaattgcaaggcctgaatttatgttagaacatgacattgggaagatactggaggaaaca
ctgtcttctcatgctgatgctcggcttaagattcaagcattgcaaaacatgttcgagtat
cttcttgatgctgaaagcaaaatggaagcagaagttgatgataatgtacctggtcactcg
gtcagagctgggcagagtgtacctgttgctgccggggctggagatacaaacatatgtggg
ggtattgttcagttgtactgggacaatattttgggccgatgtttggattgtgatgaacaa
gttcgacaatcagccttgaagattgttgaaattgtgctgcgccaaggtcttgttcatccc
atcacctgtgttccatatcttatagcacttgaaacagatcctctggagtcaaattcaaaa
ttggctcatcatctcctaatgaatatgaatgagaagtatcctgcattttttgaaagccgc
ctgggtgatggacttcaaatgtcttttatgttcatgcaagctatttgtgttattcctgat
gaaaatgttaaccacaagaccccatctaagatccctgtttctggaaaagggaaacctgag
tctgactcaatcactcaatcaagagttggggtttctcgaatatacaagctcatccgaggg
aaccggatgtcgaggaataaatttatgtcctcaatagtgcgaaaatttgataatccaaaa
tggaacaaatttgtaatagctttcttaacgtactgcacagaggttcttgccttgctccca
ttcattgcacctgatgaaccactttatttaatctatgctatcaatagagtagttcaggtt
agggctggtcaactggaggcgaacttcaaagcctggtgttcaagcttattacggagtgag
ggtgacgttacacctcatgggaatggaatgcatcaacaagcgccaaatgaacctattcat
tcaacccaagttatgtcaacagacttaaatggcacatttcagcaaagtgtagatgttcag
cccaacctcgatgacatgccttctgtggatttaaatggaacaaatcaccaattgccagat
tatcctttatcacataatggtaggtcaaaagtaaaggcacatgctggaggttatgcagat
acctttaccttctcaaaagatgatctggagaaagttcaggccggttgtttgtatgcaatt
gcattgcaacttcttttaaagctaaagagacacctaaaaatcatgtacagtctcgatgat
gccagatgtcaggcttattctccaagtgaaccgccaaaacctggtgaggttttctcaaga
cagagtattccatttaatgttggtgaatctcagttcagtttgcctacaaatccacaagaa
ttaattcaaagatatcaggagtttaagaatgcattgaaagacgacacaatggattattca
ctctatacagcaaatataaaacggaagcgacaaacgcccacgcccagaaaagttcaagtt
cggaaacctggacctatgttaggtggtgatagcgatgaggaagacgatgaggaatgggct
ggtggaatgcgcaatataaattttagcggtggtcgcagacaaagccttagaagctctaga
caataa
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