KEGG   Pisum sativum (pea): 127121449
Entry
127121449         CDS       T08598                                 
Name
(RefSeq) replication factor C subunit 2-like
  KO
K10755  replication factor C subunit 2/4
Organism
psat  Pisum sativum (pea)
Pathway
psat03030  DNA replication
psat03410  Base excision repair
psat03420  Nucleotide excision repair
psat03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:psat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    127121449
   03410 Base excision repair
    127121449
   03420 Nucleotide excision repair
    127121449
   03430 Mismatch repair
    127121449
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psat03032]
    127121449
   03036 Chromosome and associated proteins [BR:psat03036]
    127121449
   03400 DNA repair and recombination proteins [BR:psat03400]
    127121449
DNA replication proteins [BR:psat03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    127121449
  DNA Replication Termination Factors
   ELG1-RFC complex
    127121449
Chromosome and associated proteins [BR:psat03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    127121449
DNA repair and recombination proteins [BR:psat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     127121449
  Check point factors
   HRAD17(Rad24)-RFC complex
    127121449
SSDB
Motif
Pfam: AAA DNA_pol3_delta2 AAA_14 AAA_22 AAA_16 Rad17 Mg_chelatase Viral_helicase1 AAA_11 nSTAND3 AAA_5 RuvB_N AAA_24 AAA_19 AAA_28 AAA_30 MeaB AAA_25 RNA_helicase AAA_18 ABC_tran AAA_3 bpMoxR KTI12 NTPase_1 IstB_IS21 SLFN-g3_helicase AAA_7 NPHP3_N T2SSE DO-GTPase1 AAA_29
Other DBs
NCBI-GeneID: 127121449
NCBI-ProteinID: XP_050907893
LinkDB
Position
2:complement(378060172..378063749)
AA seq 195 aa
MASSSSSNSANYDVPWVEKYRPSKVVDIVGNEDDVSRLQVIARDGNMPNLILSGPPGTGK
TTSILALAHELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE
ADSMTSGAQQALRRTMEIYSNSTRFALGCNTSSKIIEPIQSRCAIVRFSRLSDQEILGRL
MVVVQAEKVHDGSVV
NT seq 588 nt   +upstreamnt  +downstreamnt
atggcatcgtcatcctcaagcaacagcgcaaactacgacgtaccgtgggttgagaagtac
cgacccagcaaggtcgtcgacatcgtcggcaatgaagacgacgtctcccggctccaagtc
atcgctcgtgacggcaacatgcccaacctcattttatcaggtcctcctggaactggaaaa
accactagcatcctcgcacttgcgcacgagcttctcggtcccaattacagagaagctgtt
cttgaactaaatgcttcagatgatagaggaatagatgttgtgaggaacaagatcaagatg
tttgctcaaaagaaagtaacacttcctccaggccgacacaaagttgttatactcgatgaa
gctgacagtatgacatctggagcacagcaagctttaagaaggacgatggagatatattct
aattctactcgtttcgcgcttggttgcaatacatcgtctaagattattgagccgattcag
agtaggtgtgcaattgtgagattttcgcgactatctgatcaagagatacttggtcgtctc
atggttgtggttcaagctgagaaggttcatgatggttctgttgtatga

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