Pisum sativum (pea): 127122430
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Entry
127122430 CDS
T08598
Name
(RefSeq) polyadenylation and cleavage factor homolog 4
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
psat
Pisum sativum (pea)
Pathway
psat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127122430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psat03021
]
127122430
03019 Messenger RNA biogenesis [BR:
psat03019
]
127122430
Transcription machinery [BR:
psat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
127122430
Messenger RNA biogenesis [BR:
psat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
127122430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_PCFS4
CID
zf_UBZ
Pcf11_C
VHS
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
127122430
NCBI-ProteinID:
XP_050908730
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All DBs
Position
1:complement(139947004..139952907)
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AA seq
840 aa
AA seq
DB search
MSNENGQKPPPSILVGRFKALLKQREDDPRLRNSQPSTEEIVQIYESLLAELTSNVKPII
TDLTIIAEQHREHARGIAYAICARILEVSADHKLPSLYLLDSVVKNVGQEYVRYFSLRLP
EVFCEAYRQVNPSLHSAMRHLFSTWSKVFPPSVLRKIEVQLQFSPAVNNQPSSVNPLRAS
ESPRPTHGIHVNPKYIRQMEHSTSIMDSVVGERLGSPGTVGNGNFGLAANKVHQFVPNRV
GKSSSPSRVELDRHMPTYMDEYVVDNSAGRTVERESPHHAVDYRLVKGLGREEELRDWPR
KQFSGDGPKRFPTSVTYSLSNGQPRQNPRALIDAYGSDKSQETSGSKPLLVERLDRNGMD
KVVTTSWQNTEEEEFDWEDMSPTLMDHSRNNGFLQPTSGFSSEKPVTLPGSATSSVSRMF
HGLKSNMEYRPPVLPGTFEIRNSINALAPRPPSLNPTFPFKNPVRNPFESINANSTIVSH
GLNRPFPIHEQSLPGAENNDISKRNQYQLPNQLAGLISSNPQNPVQAPQLQFFPSQDPAA
SQFSYRPSLQGHGAAISTPMSNARPVMPFPLPGQRTANNSFHFQGGPLRPLPPAGPHAPS
QMLPHPNPSPFVSSQQPTVGYSNLINSLMAQGVISLANQAPAQDFVGIEFDPDILKVRHD
SAIKALYGDLPRQCTTCGLRFKSQDEHSSHMDWHVTKNRMSKNRKQKPSRKWFVSETMWL
SGAEALGAESAPGFLPTETTEEKKEDEELAVPAEEDQNTCALCGEPFDEFYSDETEEWMY
RGAVYLNAPNGITAGMDRSQLGPVIHAKCRSESTTTPSEDFVMDEGGTYEEGNERKRMRV
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgagaatggacagaaacccccaccgtcgatactggttggtcgattcaaggct
ttgttgaagcaacgtgaagatgacccaaggctgagaaattcgcaaccttcaacagaagaa
attgttcagatttacgagtcgttattggctgaactcacgtctaatgtgaaacctatcatc
actgatcttacaatcattgctgaacaacatagggaacatgctagaggaatcgcttatgct
atttgcgctcgtattctcgaggtgtctgcagatcataagcttccttcactctatctcttg
gacagtgttgtgaagaatgttggccaggaatatgttcgatacttctcattacgtctaccc
gaagttttctgcgaggcatacagacaggttaatccaagtttgcattctgccatgcgacat
ctctttagtacctggtcaaaagttttccctccctctgtcttacggaagattgaagtgcaa
ttgcaattttctccagcagttaataatcaaccatcaagtgttaatcccctcagggcttct
gaatctcctcggccaactcatgggatacatgttaacccaaaatacataagacaaatggaa
cactctacttcaattatggatagtgttgtgggtgaaaggttaggttcaccaggaactgta
ggaaatggaaactttggccttgcagctaataaggttcatcaatttgtgccaaatagggtt
ggcaaatcctcttcaccatcaagagttgaacttgataggcatatgcccacatatatggat
gaatatgtagttgacaattctgctggcaggacagttgagagagaatctcctcatcacgcc
gttgattatagactagttaaaggattaggtagagaagaagagttgcgtgattggccgcga
aagcagttttctggtgatggtccaaagagatttccaacttctgtgacgtacagtcttagt
aacggacaaccacgccaaaatccaagagctctaattgatgcctatggtagtgacaaaagc
caagaaacttctggcagtaagcctttgttagttgagcggctggatagaaatggcatggat
aaggttgtgacaacatcatggcagaacactgaagaggaggaatttgattgggaagatatg
agtccaacactaatggaccatagtagaaacaatggtttcctgcaaccaactagtggtttt
tcctcagaaaagcctgttactcttccaggcagtgcaacttcttcagtgtcaaggatgttt
catggtctcaagtctaatatggagtaccgtccaccagttttgccgggaacttttgaaata
aggaactctataaatgcgcttgctcctcgtcctcccagcttaaatcctacatttccattt
aagaatcctgttaggaatccatttgaatcaataaatgctaatagtaccattgtgagtcat
ggtctaaatagaccatttccgatccatgaacaatcgttgcccggtgctgagaataatgac
atcagtaaaagaaaccagtatcagttacctaatcagctagctggtctgatttcatctaat
ccgcaaaaccctgtacaagcacctcagttacagttttttccatctcaggatccagcagca
tcacaatttagttataggccctctttgcaaggacatggtgctgctataagtacccccatg
tcaaatgcccgacctgttatgccattccctttgcctggccaaagaactgcaaacaactct
tttcatttccagggaggaccgttgcggcctttacccccagccggtccacatgctccatcc
cagatgctgcctcatcccaatcctagtccttttgtttcaagccaacagcccacagttgga
tattctaatttgattaattcactcatggcccaaggtgtaatctcgttggctaatcaagcc
cctgcacaagattttgttggaattgagtttgatccagatattctgaaggtccgtcacgat
tctgcaatcaaagccttatatggtgatcttcctagacaatgcacaacttgtggcctccgt
tttaaatcccaagatgagcacagcagtcacatggattggcatgtgactaagaaccgtatg
tctaaaaaccgtaagcaaaaaccctctcgcaagtggtttgtgagtgagacgatgtggctt
agtggtgcagaggcattgggagctgaatcagctccagggtttttgccaaccgagactact
gaggaaaagaaagaagatgaagagttggcggttcctgctgaagaggaccaaaatacatgt
gcattatgtggagagccttttgatgagttttacagtgatgaaacggaggagtggatgtat
agaggagctgtataccttaacgcgcctaacggaataacagcaggcatggacaggtcgcag
ttaggccccgttatccatgctaaatgcagatctgaatctactaccaccccgtctgaagat
tttgtgatggatgaagggggcacctatgaagaaggaaatgaaagaaaacgaatgcgggtc
tga
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