Lathyrus oleraceus (garden pea): 127125451
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Entry
127125451 CDS
T08598
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
127125451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psat04121
]
127125451
Ubiquitin system [BR:
psat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
127125451
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_NXF1-5
LRR_8
Motif
Other DBs
NCBI-GeneID:
127125451
NCBI-ProteinID:
XP_050910175
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Position
3:complement(80282499..80286214)
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AA seq
584 aa
AA seq
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MQKMTNRFPEEVLEYVFSFIQCDKDRNSISLVCKSWYEIERWCRRQIFVGNCYAVSPVTV
TKRFPELRSISLKGKPHFADFNLVPEGWGGFVSPWIAAMACGLPLLEEIRLKRMVITDES
LELIAKSFKNFKVLVLISCEGFTTEGLAAIASNCRNLKELNLQESELEDLSGHWLSQFPD
SYTSLVSLNISCLNNEVSLSALERLLGRCPNLQTLRLNHAAALDKLPNLLSRCPQLAELG
TGIYSAEMRPEVFSNLVTAFSGCKQLKSLSGFWQVLPSYLPALNPVCSRLTSLNLSYAVI
QSSDLIKLVGQCPNLLRFWVLDYIEDAGLDVVAASCKYLQELRVFPSDPFGLEPNIALTE
QGLVSVSKGCPKLQSILYFCRQMSNAALNTIAQNRPNLTRFRLCILEPRTPDYLTLQPLD
SGFGAIVEHCKDLQRLSLSGLLTDRVFEYIGTHAKKLEMLSVAFAGESDLGLHYMLSGCD
NLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCPVSYGACKLLGQKMPRLNVEVIDER
GPPDSRPDSCPVEKLYIYRSTAGPRLDMPGFVWTMEDDSSLRSV
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatgacgaaccggttccctgaggaagttctcgagtacgtgttctcgttcatt
caatgtgacaaagaccgaaactccatctctctagtgtgtaagtcgtggtacgagatcgaa
cggtggtgcaggaggcagattttcgtcggaaactgctacgctgttagtcctgtcacggtg
acgaaacggttcccggagttgagatccatttcgttgaaagggaaaccgcactttgcggac
ttcaatttggtgcctgaaggttggggaggtttcgttagtccgtggatcgcggctatggct
tgtggtttgccgttgctcgaagagattcggctcaagaggatggttataacggatgagagc
ttggagcttattgctaaatcgtttaagaattttaaagttttggttcttatttcgtgtgag
ggtttcactacggaaggacttgccgccattgcttctaattgcaggaatttgaaggaattg
aacttgcaggagagtgaactggaggaccttagtgggcattggctaagccaattccctgat
tcttacacatccttagtttcacttaacatctcttgcttgaacaatgaggtgagtttgtcc
gcactagagcgcctgcttggtaggtgtcctaacctccagactcttcgtctcaatcatgct
gcagcccttgataaactgccgaacttacttagccgatgtcctcagctggctgagttaggc
acaggaatctactcagctgagatgcgcccagaggtcttctcaaaccttgtaacagcattt
tctgggtgcaagcaattgaagagcttgtctggtttttggcaagttctgccatcctacctt
ccggcactaaatccggtctgctctaggctaacatcactaaacctgagttatgctgtcatt
caaagctccgatcttatcaagcttgtcggtcaatgccccaatttgttgcggttttgggtg
cttgattacatagaagatgctggtcttgatgtcgttgctgcttcatgcaagtatctacag
gagttgagggtgtttccttctgatccatttggtttagaaccaaatattgcgttgacagaa
cagggtcttgtctctgtatctaaaggctgcccaaagctccagtccattctatatttttgt
cgtcaaatgtctaacgctgctctaaatactattgcgcagaataggcctaatttgactcgc
tttcgcctgtgtattctggagcctcgaactcctgactatcttacccttcaaccactggat
tctggttttggagctattgtagagcattgtaaggatcttcagcgcctttccctttccggc
cttctaactgatcgtgtttttgagtatattggaactcatgcgaagaagctggagatgcta
tctgttgcctttgccggagagagcgatttgggtctccattatatgctgtccgggtgtgat
aatcttaggaagctagagatcagggactgcccctttggcgacaaggctctcttggccaat
gcggcaaaactcgagacaatgcgatccctttggatgtcctcttgcccagtgagttatgga
gcctgtaagctactgggtcagaaaatgcccagacttaatgttgaagtcattgatgaaaga
ggacctccagattcaaggccagacagttgtcctgttgagaagctctatatatacaggagt
actgctgggccaaggctggacatgcctggttttgtctggacaatggaggatgattcctcc
ctgcgcagtgtatag
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