Pisum sativum (pea): 127125472
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Entry
127125472 CDS
T08598
Name
(RefSeq) pre-mRNA-splicing factor prp12 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
psat
Pisum sativum (pea)
Pathway
psat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127125472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psat03021
]
127125472
03041 Spliceosome [BR:
psat03041
]
127125472
03036 Chromosome and associated proteins [BR:
psat03036
]
127125472
Transcription machinery [BR:
psat03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
127125472
Spliceosome [BR:
psat03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
127125472
Complex B
127125472
Complex C
U2 SnRNP specific factors
127125472
Chromosome and associated proteins [BR:
psat03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
127125472
TFTC complex
127125472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
CPSF_A
Motif
Other DBs
NCBI-GeneID:
127125472
NCBI-ProteinID:
XP_050910208
LinkDB
All DBs
Position
3:complement(82255825..82277215)
Genome browser
AA seq
1376 aa
AA seq
DB search
MAVSEEECSSVKSGSPSSSSPSSSPRYYLSKCVLRGSAVLQVLYANLRSPSSNDVVFGKE
TSIELVVIDEDGNVQTVCDQPVFGIIKDLAVLPWNEKFRARRPQTQGKDLLVALSDSGKL
SLLTFCNEMNRFFPITHVQLSNPGFMRDIPGRMLTVDSSGCFIAASAYEDRLALFSMSTS
MTGSDIIDERIIYPSESEWTASTSRTMEKTSISGTIWSMCFISLDFRQSSNEHNPVLAII
LNRRGAALNELLLLEWNVKAHTISVISQYVDAGHLAHSIAEVPNSSGLAFLFRAGDVLLM
DFRDPHNPLCVYKTCLNVLPFAIEEQTYMDDSCKLHDLDDEGFSVVACALLQLSDFDPMC
IDSDSGNTNSGPKYICSWSWEPENHKVPRMIFCVDTGEFFMIEVFLDSDGPKFSLSECLY
KGLPSKELLWVKGGYLASMVEMGDSVVLKLRDGRLSFKNLIQNISPIFDVAAGDYHDEKH
EQMFACCGVTPEGSLRIIRSGINVEKLLRTPSTYEGVAGTWTVRMKITDSYHSFLVLSFL
GETRILSVGLSFTDVTDSVGFQPNVCTLACGLVSDGLLVQIYQSTVKLCLPTKDGHSEGI
PLSSPICTSWSPDNLNISLGAVGHNFIVVSTSNPCFLFILGVRVLSGYQYEIYEMQHLEL
QNELSCISIPRPMYGKKQSNSSISENNSSTASFVSGVDINKTFVIGTHRPSVEIWSFDPN
GGVTVVACGTISLKSTMGTAKSFCIPQDVRLVSVDKYYVLAGLRNGMLLRFEWPTESSHS
SSINVVDTALSSINLVNSMAMAINVRNNLPCMLQLIAIRRIGITPVFLVPLDDTLDADII
ALSDRAWLLHSARHSISYTSISFQPSSHVTPVCSIDCPKGILFVAENSLHLVEMVHSKRL
NMRKFHLEGTPRKVLYHNESRMLLVMRTELSIGTCLSDICCVDPLSGSVVSSFRLKLGET
ATSMELIRFGSEQVLVVGTSLYSGPPVIPSGEAENAKGRLLVLCLVHVQNSDCGSMTFCS
KAGSSSQKTSPFNEIVGHAPEQLSSSSLGSSSDDNSSDGSKLDENEIWQFRLACATTWHG
VVQAICPYLDRYFLASAGNTFYVCGFPNDTPQRVKRYAAGRTRFMIKSLTAYVGRIAVGD
VRDGILFFSYHEEAKKLEQLYGDRSLRLVANCLLMDDNTAIVSDRKGSIAVLCSDHLEAP
NNVRSECNLSISCAYFMAEIAVSIQKSSYSYRLPADDVLSGGIGFGPKTNVDDSLQNIVL
ACTLLGSIMIFIPLSREEYELLEAVQARLVVHHLTAPVLGNDHTEFRSRENPAEVPKILD
GDMLTQFLELTNMQQNSILSLEPPEDMVKPSLKPLLTQYSVNQVIQLLERVHYALN
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttccgaagaagaatgctcttctgtcaagtcaggttctccttcttcttcttcc
ccatcctcttctccgcgctattatctctccaagtgcgtcctcagaggaagcgcggttcta
caagtcctctacgctaatcttcgttctccatcctccaacgacgtcgttttcggcaaggag
acatctatagagttggtggtgattgatgaggatgggaatgtacaaactgtctgtgatcag
cctgtttttggcatcattaaagatcttgccgtattgccgtggaatgagaaattccgtgct
cgtcgcccacagactcaaggcaaagacctcttggttgctttatctgattccggaaagctg
tcattgctcacattttgcaatgaaatgaacagattttttcctataacacatgttcaacta
tctaatcctggtttcatgagggatattccaggaagaatgctgacagttgattccagtggt
tgctttattgctgccagtgcatatgaagataggttggctctgttttcaatgtccacgtca
atgactgggagtgatatcattgatgagagaataatatatccctctgaaagtgaatggact
gcaagtacttccagaaccatggagaaaaccagtataagcggtactatttggagtatgtgc
tttatttcactggatttccgacaatcaagcaatgagcataatcctgtattagctattatt
ctaaataggaggggggctgctctaaatgaattgcttttattggaatggaatgttaaagca
catacaatctctgttatttctcagtatgttgacgccggacatctagcacatagcattgct
gaagttcccaactcttcgggacttgcatttctattccgggctggtgatgttctgttgatg
gattttagagatcctcacaatccattatgtgtctacaagacttgcttgaacgttttaccc
tttgcaatagaagagcagacttatatggacgactcttgtaaattgcacgatcttgatgat
gaaggcttcagtgttgtcgcctgtgctttgttgcagcttagcgattttgatcctatgtgc
attgacagtgacagtggcaatactaattctggtcccaagtacatatgctcctggagttgg
gaacctgaaaatcataaagttcctaggatgatcttttgtgtagacactggagagtttttt
atgattgaagtttttttggactctgatggtcctaaattcagtctctccgagtgtctctat
aaaggtctaccttctaaagaacttttgtgggttaagggtggttatctagcatcaatggta
gaaatgggggacagcgtggtcctgaaattgagagatggaagactatcctttaaaaatctt
attcaaaatatttcaccaatcttcgatgtggcagctggggattatcatgatgagaagcat
gagcaaatgtttgcttgctgtggtgtgacacctgaggggtcattaaggattattcgaagt
ggtatcaatgtagagaagctacttagaaccccttctacttatgaaggggtagctggtact
tggactgttcgaatgaaaattacggattcatatcattcttttctagttctatcatttctt
ggggagaccagaatattgtcagttggcttaagttttactgatgtgactgattctgttggt
ttccaacctaatgtctgtactttggcatgtggccttgtaagtgatggtttgcttgttcag
atttaccaatctactgttaagctttgtttgcctactaaggatggtcattctgaaggcatc
cctttgtcttctcctatttgcacatcttggtccccagacaatctgaatattagtctggga
gcagttgggcataatttcatagttgtgtcaacttctaacccatgttttttgtttatcctt
ggggttagagtgctatcaggttatcaatatgaaatttatgaaatgcaacatttggaactg
cagaacgaattatcatgtatttccatccctagacctatgtatgggaaaaaacaatcaaat
tcatccatttcagaaaataatagctcaactgcctcttttgtaagcggagtggacatcaat
aaaacatttgttattggcacccataggccttctgtggaaatttggtcttttgatccaaat
ggtggagtcacggtagttgcttgtggtacaatttcattaaaaagtacaatggggactgct
aaaagtttttgcatacctcaagatgtacgacttgtatctgttgataagtattatgttctt
gctggattgaggaatgggatgctccttcgctttgaatggccaacagagtcgtctcattca
tcatcaataaacgtggtggacactgcattatcttctataaatttggtaaattctatggcc
atggctatcaacgtgagaaataaccttccttgcatgcttcaactgattgccattcgtcgc
attggcattactccagttttcttggtgcccctggatgacacacttgatgctgatataatt
gcactgagtgatagagcttggttgttgcatagtgcaagacacagcatttcctatacttct
atctcatttcaaccatcttcacatgtaactcctgtttgctctattgactgtccaaaagga
atattgtttgttgctgagaacagtttgcatctggtggagatggtccacagcaagagactt
aatatgaggaagtttcatttagagggcactccacggaaagtcctgtatcacaacgaaagt
cggatgttacttgttatgaggactgaactgagtattggtacatgtctgtctgacatatgt
tgtgtggatcccctaagtgggtcagtagtatcttcttttagactaaaactcggagaaaca
gcaacttccatggaattaattaggtttggaagtgagcaggtgcttgtggttggaactagt
ctgtattctggtccacccgtaatccccagcggtgaagctgagaatgctaaggggcgtctt
cttgttctctgccttgttcatgtgcaaaattcagattgtggttcaatgaccttctgttcg
aaggcagggtcatcatctcaaaaaacttcacctttcaatgaaattgttgggcatgctcct
gaacagctatcaagcagtagccttggcagcagctctgatgataatagctccgatggcagc
aaacttgatgaaaatgaaatttggcagttccgattagcttgtgcaactacatggcatgga
gtagtacaggccatctgtccttatcttgatcgctattttttggcatctgctggcaatact
ttctatgtctgtggtttcccaaatgacactccgcaaagagtgaaaaggtatgccgcagga
aggacgcgtttcatgataaaatctttgactgcatatgttggtagaattgcagttggtgat
gttcgtgatggtatccttttcttttcttaccacgaggaagcaaaaaaactggagcaactt
tacggtgatcgatcgcttaggttggttgctaattgccttctcatggatgataatacggct
attgtttcagatcgtaaaggaagcatagctgttttgtgctcagatcatttggaagcacca
aataatgtaaggtcggaatgcaatttgagtataagctgtgcttatttcatggcggagata
gctgtgagcatccaaaagagctcatattcatacagacttccagctgatgatgtgttgtca
ggtggcattggttttggcccgaagacaaatgttgacgactcactacaaaatattgttctt
gcttgtactctgctaggaagcataatgatcttcatccctttatcaagagaggaatatgag
ctcttagaagctgtgcaggcaaggcttgttgtccatcatttgactgcacctgttcttgga
aacgatcatactgagtttcggagccgtgaaaatccagctgaagtaccaaagatacttgat
ggggacatgttgactcagtttctggagcttacgaatatgcagcaaaatagcattttatct
ttggaaccacctgaagatatggtaaaaccaagtttgaagccactccttacccaatattct
gtcaaccaagtcattcaacttcttgaacgagttcattatgcactgaactaa
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integrated database retrieval system
