KEGG   Lathyrus oleraceus (garden pea): 127126181
Entry
127126181         CDS       T08598                                 
Name
(RefSeq) sm-like protein LSM2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
psat  Lathyrus oleraceus (garden pea)
Pathway
psat03018  RNA degradation
psat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127126181
  09123 Folding, sorting and degradation
   03018 RNA degradation
    127126181
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psat03019]
    127126181
   03041 Spliceosome [BR:psat03041]
    127126181
Messenger RNA biogenesis [BR:psat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     127126181
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     127126181
Spliceosome [BR:psat03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    127126181
 Complex C
  U2 snRNP components
    127126181
SSDB
Motif
Pfam: LSM SM-ATX DUF150_C DUF1256
Other DBs
NCBI-GeneID: 127126181
NCBI-ProteinID: XP_050911021
LinkDB
Position
3:complement(188952136..188957165)
AA seq 93 aa
MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
FIRGSVVRYVQLPPEGVDIELLHDATRREARGG
NT seq 282 nt   +upstreamnt  +downstreamnt
atgttgttcttttcgtacttcaaagatttggtgggaagagaagtgacggtagaactcaag
aacgatttggccatcagagggacattgcattctgttgatcaatacctcaacatcaagctc
gaaaatactcgtgttgttgatcaagacaagtaccctcacatgctttctgtaaggaactgc
ttcatcagaggatcagtggtgagatatgtgcaattgcctccagaaggtgtggacattgaa
ctattgcacgatgctacaaggagagaagcccggggtggttga

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