Lathyrus oleraceus (garden pea): 127126181
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Entry
127126181 CDS
T08598
Name
(RefSeq) sm-like protein LSM2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat03018
RNA degradation
psat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127126181
09123 Folding, sorting and degradation
03018 RNA degradation
127126181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psat03019
]
127126181
03041 Spliceosome [BR:
psat03041
]
127126181
Messenger RNA biogenesis [BR:
psat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127126181
mRNA degradation factors
5'-3' decay
Lsm complex
127126181
Spliceosome [BR:
psat03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
127126181
Complex C
U2 snRNP components
127126181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF150_C
DUF1256
Motif
Other DBs
NCBI-GeneID:
127126181
NCBI-ProteinID:
XP_050911021
LinkDB
All DBs
Position
3:complement(188952136..188957165)
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AA seq
93 aa
AA seq
DB search
MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
FIRGSVVRYVQLPPEGVDIELLHDATRREARGG
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcttttcgtacttcaaagatttggtgggaagagaagtgacggtagaactcaag
aacgatttggccatcagagggacattgcattctgttgatcaatacctcaacatcaagctc
gaaaatactcgtgttgttgatcaagacaagtaccctcacatgctttctgtaaggaactgc
ttcatcagaggatcagtggtgagatatgtgcaattgcctccagaaggtgtggacattgaa
ctattgcacgatgctacaaggagagaagcccggggtggttga
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