Lathyrus oleraceus (garden pea): 127126659
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Entry
127126659 CDS
T08598
Name
(RefSeq) uncharacterized protein LOC127126659
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127126659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psat03019
]
127126659
Messenger RNA biogenesis [BR:
psat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127126659
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127126659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
bL9m_N
Motif
Other DBs
NCBI-GeneID:
127126659
NCBI-ProteinID:
XP_050911577
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All DBs
Position
3:complement(246493656..246504609)
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AA seq
900 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSAAYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPREKAKSETRDWLNNVVGELESQIDNFEAELEGLTVKKGKNRPPRLTHLETSITRHKA
HIKKCELVLRLLDNDELSPEQVNDVKDFLDDYVERNQEDFDEFDDVDELYISLPLDKVDT
LEDLVTIPTSVAVAKTISSLPLDEGKILEDLVTIPTGLAKVAPGISLKSPLAVSASQSAS
SQTSEQADETASQDSNSDIVAKTPPPKSGGISSSASTPTGNNATPAFVNVSGHNLSSSPA
AVLPVSNSVRNVLENANVNQSASTKEEDINSFPSRRPSPSLSDAALVRGRNSLSNQATAS
IPLGSGNMVSGNGAFGSLPSASEITKRNILAADDRLGSSGMVQPLVSPLSNRLILPQVGK
VNDGTASVDSSTVNEAAAVSGRVFSPSVVPGMQWRPGSPFPNQNDAGQLRGRTEIAPDQR
EKFLQKFQQVQQQGPSTLLNMPSLVAGNHKQFSSQQQSPLLQQFNSQGSSVSSQSSMGLG
AQSPSLGGISSVSLQQPNSVHPPSSQQAIPGAAKDADKIEEQQQHQSFPDESTTEPTSTG
IGKNLIVEDDLKSAYVADSPVGASASLPEAAQISRDIDLSPGQPLQSNQSAGHLGVIGRR
NGVDLGAIGDSFSASSVNSGGVRDQLYNLQMLEAAHFKVPLAKDSERPRTYTPRHPAITP
PSYPQVQAPIVNNPAFWERLGLEAYGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRK
YNTWFQRHEEPKVATDDFEQGTYVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELLV
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcaagtcgaaagcttcaaggagagatagatcgtgttctcaagaaggttcaggaa
ggcgttgaagtatttgacagcatctggaacaaggtttacgacacagacaatgcaaatcaa
aaggagaaattcgaggcagacctcaaaaaggagattaagaagctccagaggtatagagat
caaattaagacttggattcaatccagtgagatcaaggataagaaggttagtgccgcgtac
gagcaagctctggtagatgctcggaagttaattgaacgagaaatggaaagatttaaaata
tgtgagaaggaaactaagaccaaagcattctccaaagaaggcttgggtcaacagccgaag
acagatccgagagagaaggctaaatcagagacgagggattggttaaacaatgtggtcgga
gagttagaatctcagatcgataactttgaagctgagcttgaaggccttacagtcaagaaa
ggaaaaaacaggcctcctagattgacgcatctagagacatcaattactcggcacaaggct
catataaagaaatgtgaattagttttgaggcttctagataatgacgaattgagtccagag
caggttaatgatgtgaaagatttcttggacgactatgtagagcgtaatcaggaggatttt
gacgaatttgatgatgttgatgaactatacatttcattacctttagataaggttgatact
ctagaagatcttgttacaattcccacaagtgttgcagttgcaaagacaatcagttcattg
cctttagacgaagggaagattctagaagatcttgttacaattcccactggtcttgcaaag
gtggcacctggtattagcttgaagagtcctttggcagtatcggcatcacagtcagcatca
tcgcaaacatctgagcaagctgacgagacagcgtctcaagatagcaattctgacattgtg
gcaaaaactccacctcctaaaagtggcggaatcagctcttctgcttcaacacctaccggg
aacaatgccactcctgcttttgtgaatgtttcaggtcataacttgtccagttctccggct
gcggtccttcctgtctcaaattctgttcgaaatgtcttggagaatgctaatgtaaatcag
tcggcctctacaaaggaagaagatattaacagcttccctagccgtaggccatctccttcg
ctttctgatgcagctcttgtgaggggcagaaacagcttgtcgaatcaagcaacagccagc
atccctcttggttccggaaacatggtttctggtaatggagcctttggttcactcccttca
gcctcagaaataactaagcgaaacatattggcagctgatgatagacttggaagtagtgga
atggtgcaacctcttgtatcaccactaagtaatagattgatcttgcctcaggttgggaag
gttaatgatggaactgcctctgttgactctagtactgttaatgaagctgcagcagtatct
gggagagttttctccccttctgtggttcctggcatgcaatggaggcctggaagtcccttt
ccgaatcagaatgatgcggggcagcttcgtggaagaactgaaatagctcctgatcaaagg
gaaaagtttctgcagaagtttcagcaagtgcaacaacaagggcccagtacccttcttaat
atgccttcccttgttgcaggaaatcataagcagttttcttcccaacaacaaagtccactt
ttgcagcagttcaactctcaaggctcatccgtttcttcacaatctagtatgggacttgga
gcccaatccccgagtcttggtggtatttcttctgtctcgctacagcagcccaactccgta
catccgccgtctagtcaacaagcaattccaggtgctgctaaagatgcagataaaattgaa
gaacagcaacaacatcagagttttcctgacgagtccacaactgaacccactagcacaggg
attggcaagaatctcatagttgaagatgatttgaaatcagcatatgttgcagattcacct
gtaggtgcatctgcctctcttccagaagctgctcagatttccagagatattgatttgtct
cctggtcaacctttacaatcaaatcaatctgctggccaccttggagtcattggaagaaga
aatggtgttgaccttggagccattggtgatagctttagtgcatcaagtgttaattctggt
ggagtgcgtgatcaactatataatttacaaatgcttgaggcagcacattttaaagttcca
cttgctaaagactcagagcgtcctagaacttatacacctaggcatccagcaattacacct
cctagctatccacaagtacaagcgcctatagttaacaaccctgccttttgggagagatta
ggtcttgaggcatatggcactgacaccctgttctttgcattttattatcaacagaacaca
taccaacaatatttggctgcaaaggagctaaagaagcagtcttggagataccaccgaaag
tataatacatggtttcagcgtcatgaagagcccaaagttgctacggatgattttgagcag
ggaacatatgtgtattttgattttcatattgcaaatgatgacctgcaacatggatggtgt
caaagaatcaagactgaattcacttttgagtataattatcttgaagacgagcttcttgta
tag
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