Lathyrus oleraceus (garden pea): 127127277
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Entry
127127277 CDS
T08598
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13-like
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
psat
Lathyrus oleraceus (garden pea)
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psat03009
]
127127277
Enzymes [BR:
psat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127127277
Ribosome biogenesis [BR:
psat03009
]
Eukaryotic type
Pre-60S particles
Helicases
127127277
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
AAA_22
Utp25_C
Motif
Other DBs
NCBI-GeneID:
127127277
NCBI-ProteinID:
XP_050912385
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All DBs
Position
3:305091839..305099746
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AA seq
795 aa
AA seq
DB search
MAEAATSSTRKAKRNNRNLKTQDPELDRLESLPWNSSLPQHDEQDDNTFSLFTGSNELEG
GFLSLEEIDEAEYGLNIPDPENHDRKHNSKQNKKLNKQKQDSTCSDGETLNDESIKSKVK
KKKKKKSKNAKENQKVQRLNADADVKDVVEEETTDETEYYAWNELRLHPLLMKAIHKLGF
KEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEREKASNVVDEKGEE
AEKYVSTGLLRSLIIAPTRELALQVTDHLKAVAQYINVRVTPIVGGILAEKQERLLKARP
EIVVGTPGRLWELMSSGEKHLVELHSLSFFVLDEADRMVQNGHFKELQSIIDMLPMSNIS
SEDNSQDAQSCITVSSVQRKKRQTLVFSATVALSADFRKKLKRSSIQKKQLSTDGLDSIE
TLSERAGMKPNAAIIDLTNPSILAAKIEESFIECTEDDKDAHLYYILTVHGQGRTIVFCT
SIAALRHISSILRILGVNVWTLHAQMQQRARLKAMDRFREKENGILVATDVAARGLDIPG
VKTVVHYQLPHSAEVYVHRSGRTARASAEGCSIALISPKDTSKFASLCKSFSKDTFQRFP
LENSYMPEILKRLSLARQIDKITRKDSQEKAEKSWFDRNASSVDLVTENYDSEEEQVNKH
RQKKASSKKLKNLHTELSMLISRPLQSKTFSHRYLAGAGVTPLMQEQLQQLARQKLSDRQ
GAVFGKKGKLVVIGQDCVDALHALRSAGEEVRMDIKDSTGRQRNSVSSKRKRKEEKTRLC
DQRKKKKRDLNQDDE
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcagcaacttcttcgacgagaaaagccaaaaggaataaccgtaacctaaaa
actcaggatcctgagctcgaccgcctcgaatcgcttccatggaactcttctctccctcaa
catgatgaacaagacgacaacactttttcactcttcactggctccaatgaactcgaagga
ggttttctttcacttgaggagattgatgaagctgagtatggtttaaatattcctgatcct
gaaaatcatgacaggaaacacaattctaaacagaacaagaagttgaataagcagaagcaa
gacagtacttgtagtgatggagaaacgttgaatgatgagagcattaagtctaaagtgaag
aaaaagaaaaagaagaaaagcaagaatgcaaaagaaaaccagaaagttcagcggttaaat
gctgatgctgatgtgaaggatgttgttgaggaagagaccactgatgaaactgaatattat
gcatggaacgagttgaggcttcatcctcttttaatgaaagcaatacacaagttaggattc
aaggaaccaacaccgatacaaaaagcttgtattccggctgctgctcatcaagggaaggat
gttattggggctgcagagacaggatctggtaaaacacttgcatttggtttgcccattttg
caacgtcttttagaggagcgtgagaaggcttcaaatgtggttgatgaaaagggtgaagaa
gctgaaaaatatgtttccacgggccttttaaggagtcttattattgctccaactagagaa
cttgcacttcaggtcaccgatcatctgaaagcagtagcccagtatattaatgttagggtg
acccctatagttggaggtattttagcagaaaagcaggaaagacttttaaaagcaaggcct
gagattgtggttggtactccagggaggttatgggaacttatgtcatctggagaaaagcat
ctggttgagttacattcactgtctttctttgtgcttgacgaggccgaccgaatggtacaa
aatggtcattttaaggagttgcaatcaataattgacatgcttcccatgtccaatatctcc
agtgaagataattctcaagatgcacaaagttgtattacagtttctagtgtccaaagaaag
aaaaggcaaactcttgttttctctgcaactgtcgcactatctgctgattttcgcaagaag
ctaaagcgcagttcaattcagaaaaagcaactatcgacagatggtttggattctattgaa
actctttctgagcgagcgggaatgaaacccaatgcagcaattattgatcttaccaatcca
tcaatattagcagccaaaattgaggagtcatttattgaatgcacggaagatgataaagat
gcccatttgtattatattctcactgtccatggacaaggacgcacaatagttttttgtacg
tcaattgcagctctgcgccatatttcttccatattgcgtattcttggcgtcaatgtttgg
actcttcatgctcaaatgcaacagcgagcgcgtttaaaggccatggaccgctttcgtgaa
aaggaaaatggcatacttgttgccacagatgttgctgcaagaggtcttgatattcccggt
gttaaaactgttgtccattatcagcttccacattcagctgaggtttatgttcatagaagt
ggaagaacagctagagcttctgctgaaggttgtagcattgctttaatctccccaaaagat
acatcaaagtttgcttcattgtgcaagtcattttcaaaggatacctttcagcggtttcct
ttggagaactcgtacatgccagagattctaaaacgattgtctcttgctcgtcaaatagac
aagataacaaggaaagattcccaggagaaggcagagaaaagctggtttgatcggaatgct
agctcagtggatttagttaccgaaaattatgacagtgaggaggaacaagttaataaacat
aggcaaaagaaagccagctctaagaaattgaagaatttgcacacggagctcagtatgctg
atttcacgtcctctgcaatcaaaaacattttcacatcgatatttagcaggggctggtgta
acacccctcatgcaggaacaattgcaacaattagcaaggcaaaagttaagtgatcgccag
ggtgcagtattcggcaaaaagggaaaattggttgtgattggtcaagattgtgtggacgca
cttcacgcacttcggagtgctggtgaagaggtgcgcatggatatcaaggattcaacagga
agacaaagaaactcagtgagttctaagagaaaaaggaaagaggaaaagacacgtttgtgt
gatcagcgtaaaaagaaaaagagagatctaaaccaggacgatgaatag
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