Lathyrus oleraceus (garden pea): 127128364
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Entry
127128364 CDS
T08598
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain phosphatase-like 3
KO
K18999
RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:
3.1.3.16
]
Organism
psat
Lathyrus oleraceus (garden pea)
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psat01009
]
127128364
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psat03021
]
127128364
Enzymes [BR:
psat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
127128364
Protein phosphatases and associated proteins [BR:
psat01009
]
HAD phosphatases
Fcp/Scp phosphatases
127128364
Transcription machinery [BR:
psat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
127128364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_CPL3
NIF
BRCT
PTCB-BRCT
RTT107_BRCT_5
BRCT_2
Motif
Other DBs
NCBI-GeneID:
127128364
NCBI-ProteinID:
XP_050913572
LinkDB
All DBs
Position
3:496521432..496528472
Genome browser
AA seq
1241 aa
AA seq
DB search
MVFGSFLDCDNLKNLEEMGKEVVEDVEEGEISDTASVEEITEEDFKKPDVVKVNVSNSDK
TSSGGGGGGDGGGGGGSRVWAVQDLYSKYPTISRGYAAGLYNLAWAQAVQNKPLNDIFVM
ELDAVSNATNANANSNNSRNDNGDLNTPLKEVVVVDDDDDREEGELEEGEIDGDDDMDCV
MVGGDGSESVFDSEVLDVRDVLENITVANVANVAESFAETCTRLQSALQSKMFDGSEKDV
LVRLSFSAVNVIFSVFCSMEYLQKEENKDKLLRLLSFLKNEYAHLFTPEQNKEIQVMITS
IVSVDALGNSEVIGRAGKLEAFDRTQQLLGLEATGLISSSMLVHDNSANASEALIYGQNN
IKXQGVMLPLFDLHKDHDLDSLPSPTREAPSCFPVNRLLSVGDGMDRFGLPLAGKTEAVR
MELGGKDSKFHIYETDALKAFSTYQQKFSQSSFFTDDKFPSPTPSGDCEEGVVDTNGEVS
SASIAASLASSKSPPLDQMPVSSTSINRYSAKSRDPRLRFINSDASTLDLNQPLGTNNMP
KVEYAGGIISRKQKAVEEPSLDASPPKRLRRSLEISEHNTREERTTDGKGGWLEENTVIG
SQLIERNHLIQKGETELKRTMNTSSSNLTMTSSGIEQTPITSGSAATSLPELLKNIAVNP
TMLLNLLLEQQQRLAAEAQTKPVDCDTSTLHLTSSNSTSGTDPTVNTGPARTAGLPQSSV
GMLPASSPATSMTPILQVNSGKIRMKPRDPRRILHGSSTFQKGGSLGSEQSKTIVSPIPN
NQGTGENVNAQKLGVSVETNLTSPLILQPDITRQFTNNLKNIADIMSVPQEPTTHPPATQ
NVSSASVPFTSDRAEQKSVVPLPQNLKDGVESAPEICASDSSRPQNTWADVEHLFEGYDE
KQKAAIQRERTRRLEEQNKMFAARKLCLVLDLDHTLLNSAKFMEVDPVHDEILRKKEEQD
REKPHRHLFRFPHMGMWTKLRPGVWNFLEKASKLFEMHLYTMGNKLYATEMAKVLDPKGV
LFAGRVISRGDDTETVDGDERVPKSKDLEGVLGMESSVVIIDDSVRVWPHNKLNLIVVER
YTYFPCSRRQFGLPGPSLLEIDHDERPDTGSLASSLGVIERIHQNFFASQSLEEVDVRNI
LASEQRKILDGCRIVFSRVFPVGEANPHLHPLWQTAEQFGASCTNQIDDQVTHVVANSLG
TDKVNWAISNGKFVVHPSWVEASALLYRRANEQEFVIKSEK
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggtttttggatcgtttttggattgtgataatttgaaaaacttggaggaaatggggaaa
gaggttgttgaagatgtggaagagggtgagatttctgatactgcttcggttgaagagatt
actgaagaggattttaagaaaccagatgttgttaaagtgaatgttagtaatagtgataag
acttctagtggtggtggtggtggtggtgatggtggtggtggtggtggttctagggtttgg
gctgttcaggatttgtattcgaagtatcctactatatcacgtggttatgctgcgggattg
tataatcttgcttgggcgcaggcggttcagaataagcctttgaatgatatttttgttatg
gaacttgatgctgtttctaatgctacgaatgctaatgctaatagtaacaatagcagaaat
gataatggtgatttgaatacaccgttgaaggaggttgttgtggtggatgatgatgatgat
agagaggaaggggagttggaggagggtgagattgatggtgatgatgatatggattgtgtt
atggtgggcggtgatggttcggagagtgtttttgactctgaggtgcttgatgttagggat
gttttggagaatattactgttgccaatgtggccaatgttgcagaatcgtttgctgaaact
tgtactaggcttcagagtgccttgcagagcaaaatgttcgatggttctgaaaaagacgtt
cttgttcgtttgtcattcagtgcagttaatgtgattttttctgtgttttgctctatggaa
tatttgcaaaaggaagagaataaggataaattattaagattgctttcttttctgaagaat
gagtatgctcatttatttactccagagcagaataaagagattcaggtcatgattacttca
attgtttctgttgacgctctgggcaatagtgaggttattggcagggcgggaaaattggag
gcctttgatagaactcagcaacttctaggtttagaagccactggattgatttcttccagt
atgcttgtccatgataactcagccaatgcatccgaagccttgatatatggacagaacaat
attaaanggcagggggttatgctcccactgtttgacctacacaaggatcatgatttagac
agtttaccgtcacccacacgagaagctccgtcctgctttcctgtgaatagattgttatcg
gttggagatggaatggatagatttgggttgcctcttgctggtaagacagaggctgtgagg
atggagctgggtggtaaagattccaagtttcacatctatgaaactgatgctctgaaagct
ttttccacgtatcaacaaaagtttagtcagagttccttctttaccgatgataagtttcca
agtccaactccttcgggtgactgtgaggaaggggttgttgatactaatggtgaggtttca
agtgcttctatagctgcttcactagcaagctctaagtcaccccccttggatcaaatgcct
gtttcttctacttccatcaaccggtattcagcaaagagtagagatcctaggcttcgtttc
attaattctgatgccagtaccttagatcttaaccaaccattagggacaaataatatgccc
aaagtggaatatgctggaggaataatctcaagaaagcaaaaggctgtagaagaaccttca
ttggatgctagccctcccaaaagacttagaaggtctttggaaatttccgagcacaacacc
agagaggaaagaactacggatggaaaaggtggttggttggaagaaaatactgtgattgga
tctcagttgatagaacggaaccatttaattcaaaaaggggaaactgaactcaaaaggact
atgaacactagttctagtaatttgaccatgacaagtagcgggattgaacagacacctatt
acaagtggcagcgctgcaacttccctacctgagttattgaaaaatatagctgtaaatcca
accatgttactaaatctacttttagagcaacagcagagattagcagcagaagcccaaaca
aaacctgttgattgtgatacaagtacactgcatttaacaagctcaaattcaacaagcgga
acagacccaacagtgaatacaggtccagcaaggactgctggtcttccgcaaagttctgtt
ggaatgcttccagcttcatcaccagcaacttccatgacaccaatcctacaagttaattct
ggaaagattcgcatgaaaccccgtgacccacgtcgcattctccatggaagtagtactttc
cagaagggtgggagtttggggagtgaacaatccaaaacaattgtatcccctattccaaat
aatcagggaactggggaaaatgttaatgcccaaaagcttggtgttagtgtcgagacaaat
ttgacatctccgttaatcctgcaaccagatattactcggcagtttaccaataatctgaaa
aacattgctgatattatgtctgttccccaagaaccaacaactcaccctcctgctactcag
aatgtttcttctgcatctgtcccttttacatcagatagagctgagcagaaatctgttgta
cctctccctcagaacctgaaagatggcgtagaatcagctcctgaaatatgcgcatcagat
tcctctcgaccccagaatacatgggctgatgttgagcacctttttgaaggttatgatgag
aagcagaaagctgctattcaaagagagagaactaggaggcttgaagaacagaataaaatg
ttcgctgctaggaagttgtgccttgtattggacctagaccatacacttctcaattcggct
aagtttatggaagttgatcccgtgcatgatgagatattgagaaagaaagaagaacaagac
cgtgagaagcctcacaggcatctttttcgttttcctcatatgggaatgtggactaaactc
agaccaggagtctggaacttcctggagaaggctagtaagctctttgagatgcatctttac
actatgggaaacaagctatatgcaacagaaatggcaaaggtgcttgatccaaagggagta
ttgtttgctggtagagttatttctagaggtgatgatactgaaacagttgatggtgacgag
agagtgcctaaaagcaaagatttggaaggcgttttgggtatggaatcatctgttgtaatt
atagatgactctgtcagagtctggcctcataacaaactgaaccttatagtggtggaaagg
tacacatacttcccttgtagcagacgtcaatttgggcttcctggcccttctcttcttgag
attgatcacgatgagagacctgataccggaagtctggcatcctctttgggggttattgag
agaatacaccaaaacttttttgcttctcaatccttagaagaagtggatgtcagaaatatc
ctagcttcagagcagaggaaaatcttggatggttgtcgtatagtatttagtagggtgttt
cctgttggcgaagccaatccccaccttcacccattgtggcagacagctgaacaatttggt
gcttcttgcacaaaccaaattgatgatcaggttactcatgtagttgcgaattcccttggg
actgataaggtgaattgggctatttccaatgggaaatttgtagtccatcctagctgggtg
gaagcatcagcattgctgtataggagggcgaatgagcaagagtttgtcattaaatcagaa
aaataa
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