KEGG   Lathyrus oleraceus (garden pea): 127130466
Entry
127130466         CDS       T08598                                 
Name
(RefSeq) sm-like protein LSM8
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
psat  Lathyrus oleraceus (garden pea)
Pathway
psat03018  RNA degradation
psat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127130466
  09123 Folding, sorting and degradation
   03018 RNA degradation
    127130466
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psat03019]
    127130466
   03041 Spliceosome [BR:psat03041]
    127130466
Messenger RNA biogenesis [BR:psat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     127130466
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     127130466
Spliceosome [BR:psat03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    127130466
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 127130466
NCBI-ProteinID: XP_050915429
LinkDB
Position
3:210452261..210453014
AA seq 98 aa
MITFTKAFIILAETISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLG
LYIIRGDNISVVGELDEDLDSNLDLSKLRAHPLKPVIH
NT seq 297 nt   +upstreamnt  +downstreamnt
atgattactttcactaaagcttttattattttggcagagacaatatcagtcattacaaat
gacggacgcaatatagtgggtgtcctaaaaggctttgaccaggcaacaaatataattctt
gacgagtcacatgaacgagtttattctaccaaggaaggtgtccagcagcttgttctaggt
ttatacatcattaggggtgacaacataagtgttgttggtgaactggatgaggatctagat
tccaatttagatttgtccaagcttagagctcatcccttaaaacctgtcatccactga

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