Lathyrus oleraceus (garden pea): 127132854
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Entry
127132854 CDS
T08598
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
127132854
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psat04040
]
127132854
Ion channels [BR:
psat04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
127132854
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
DUF6111
Motif
Other DBs
NCBI-GeneID:
127132854
NCBI-ProteinID:
XP_050917656
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Position
1:313570781..313575428
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AA seq
719 aa
AA seq
DB search
MNHFDYDEVPIMFEACSQRSDEPEDSSFRKNISRTPSASISISMASLDPSDTGPLRTVRK
TPTNQMSGPLYATGNSFQTSLVMARNKVGENKTYDSDYGRRNEHLLMSGQLGMCNDPYCT
TCPTYIKVSHQRKPRASIIFDPKFHNSLYGDAKGFGRKLLSLCSPCIPGVMNPHTNFVQQ
WNKLLAIFCLVAIFVDPLFFFSIYVNVNKNNISIDIDWKMAKILVLLRSITDAVYFLNIL
LQFRLAYVSPESTVVGAGDLVDQPKEIALNYLKRYFFFDLFVVLPLPQIIIYFVLPSSLV
SSEANYAKNLLRLAILIQYIPRLFRFLPLLIGQSPTGFIFESVWASFILNLLIFMLSGHV
VGACWYLFGLQRVNQCLRDKGTSDCLDAASGAFSYGIYANAIPLYIETSVVNKYVYALFW
GFQQISTLAGNQVPSYFEWEVLFTMSIIGLGLLLFALLIGNIQNFLQGLGRRRLEMQLRG
RDVEKWMSHRRLSEELKRRVREAERYSWAATRGVPEKMVLENLPEDLLIDIRRHLFNFVT
KVRIFSHLDEEEPILEAIRERLIQTTYLKESRILSRGGLVQKMVFIVRGKLESVGEDGIP
VPLSEGDACGEELLRWYLEQSSESKDGKNKLQGEGLTSDRTVKCLTNVEAFSLRAKDIEE
VTTLFASFLRSPRVQGVIRYESPYWRSLAANRIQVAWRYMKKRLRNANTRQNEYQTLNS
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatttcgattatgacgaagttccgattatgtttgaagcatgttcgcagcgatcg
gatgaacctgaggattcttcattccgaaagaacatatcgaggacaccaagtgcttcaatc
tctatttccatggcttccttggatccatctgatactggtcctcttcgtaccgtgaggaaa
actccgaccaatcaaatgagtggtccactatatgcaactggaaattcttttcagactagt
ttagtaatggcaagaaacaaagtaggagaaaacaagacatatgatagtgactatggcaga
agaaatgaacacttgttgatgtctggacaactcggaatgtgtaatgacccttattgcact
acttgcccaacttacatcaaagtttctcatcaaagaaaaccaagagcttccattatattt
gatcccaagttccacaattctctttatggagacgccaaaggttttggaagaaaacttctt
tctttatgctctccgtgtattcccggggttatgaaccctcacactaattttgtacagcaa
tggaataagttgttggccatattttgcttggtcgcaattttcgttgatccattatttttc
ttctcaatctatgtgaatgtgaacaagaataatataagtattgatatcgattggaaaatg
gcaaaaatacttgttttacttagaagcataaccgatgctgtgtatttcttgaacatactt
cttcagtttaggttggcttatgtttctcctgagtcgacggtggttggtgccggagattta
gttgaccagcccaaggaaattgctcttaattacttgaagcgttattttttcttcgactta
tttgttgttctacctcttcctcagataataatatactttgtcctaccaagttctttggtg
tcttcagaagcaaattatgctaagaatcttctacgtctagcgatcctaatacagtatatt
cctagattgttcagatttttgcctctgttaattggccagtctccaaccggattcatattc
gagtcagtttgggcaagtttcattttaaatcttctcatttttatgctatctggccatgtt
gttggtgcatgttggtacctcttcggtctacagagggttaaccaatgtttgcgagataaa
ggtacctctgattgtttggatgccgcatctggtgctttttcttatggaatctatgccaat
gctataccactttatatagaaactagtgttgtcaacaaatatgtgtatgcactgttttgg
ggatttcagcaaattagtactctggctggtaatcaagtccctagctattttgaatgggaa
gtcctctttacaatgtccatcattggattgggactcttgctttttgctcttctcattgga
aacatacagaactttcttcaaggtcttggacggaggaggctagaaatgcaacttagaggc
cgtgatgttgagaaatggatgagccaccgtcgtttatcagaagaactcaaaaggagggta
cgggaggctgaacggtatagttgggctgcaacaagaggtgttcctgagaaaatggttctc
gagaatttgccagaagatcttctaatagacataagacgccatctcttcaattttgtcacg
aaagttcgaatattttcacatcttgatgaggaagagcctatcttagaagccatccgcgag
agactaatacagacgacatacctcaaagaaagcagaattttgagccggggtggtcttgta
cagaagatggtgtttattgtgcgtggaaagttggagagcgttggagaagatggaattccg
gttccgttatctgaaggggatgcttgtggcgaagaacttctaagatggtatcttgagcaa
tcttctgaaagcaaagatggtaaaaataagcttcaaggagaggggttgactagtgacaga
acagtaaaatgcttaaccaacgtggaggcgttttctcttcgcgctaaagacattgaagaa
gtcacaacacttttcgcaagtttcttgcggagccctcgcgttcaaggagtcataaggtat
gaatcgccttattggagatcacttgcagcaaacagaattcaggttgcatggagatacatg
aagaagcgtctacgtaacgctaatacgagacaaaacgagtatcaaacattgaactcatag
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