Lathyrus oleraceus (garden pea): 127132912
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Entry
127132912 CDS
T08598
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
127132912
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psat04040
]
127132912
Ion channels [BR:
psat04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
127132912
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
127132912
NCBI-ProteinID:
XP_050917658
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Position
1:313868703..313874202
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AA seq
760 aa
AA seq
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MNRFEKDEVPILSETRAQRSDEPVDSNLRRNISRTRSASISISMAASDPYERQPYLVGHT
GPLRSARKTPVSQMSGPLYPTPATGNPFQNSIVVAGNKVGENKTEKFDDTDEHHWNNKYD
RKNEHLVRSGQLGMCNDPYCTTCPTYFKVSQKRKPRAATIFDPKFHNSLYGDAKGFGRKL
FSFCSSCIPGVMNPHTKVVQQWNKFLAIFCLLAIFVDPLFFFLIYVEKKNICIRINWTMA
TTLVVLRSITDFVYLLNILLQFRLAYVSPESRVVGAGDLIDHPTKIALNYFKGYFFFDLF
VVSPLPQVMILFVLPTSLGSSGANYVKNLLRLAILVQYIPRLFRFLPLLIGQSPTGFIFE
SAWANFIINLLIFMLSGHVVGSCWYLFGLQRVNQCLRDACHRANLPRCMDLIDCDFKGGI
SPNWVNDKGANACLNSSSDAFSYGIYTYAVPLTTETRVINKYVYALFWGFQQISTLAGNQ
VPSYFVWEVLFTMSIIGLGLLLFALLIGNIQNFLQALGRRRLEMQLRGRDVEQWMSHRRL
PEHLKRRVRQAERYSWAATRGVPEKMVLENLPEDLVTDIRRHLFKFVKKVRIFSLMDEDE
PILDAIRERLVQTTYIKGSRILSQGGLVQKMVFIVRGKLESIGEDGIPVPLTEGDACGEE
LLRWYLEQSSESKEGKKVKLQGQGLTSDRTVRCLTNVEAFSLRSKDIEEVTTLFARFLRS
PRVQGVIRYESPYWRSLAANRIQVAWRYRKKRLSRANTTQ
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgttttgagaaagacgaagttccgattctgtcagaaacacgtgcacaacgatct
gatgaacctgtggattctaacttgcgaaggaacatatcgaggacacgaagtgcttcaatc
tctatttctatggctgcctcggatccatatgagagacaaccatatcttgtcggacatact
ggtccgcttcgttccgcaaggaaaaccccggtcagtcaaatgagtggtccactatatcct
actcctgcaacgggtaatccttttcagaatagtatagtagtggcgggaaacaaagtagga
gagaacaagacagagaagttcgatgacacggatgaacatcattggaataataaatatgac
agaaaaaatgaacatttagtgaggtctggacaactcggaatgtgtaacgatccttattgc
actacttgccctacttacttcaaagtttctcaaaaaagaaaaccacgagctgccactata
tttgatcctaagttccacaattctctttatggcgacgccaaaggttttggaagaaaactt
ttttctttctgctcttcatgcattcctggagttatgaaccctcacactaaagttgtacaa
caatggaacaaatttttggccatcttttgcttgcttgcaatttttgttgatccgttattt
ttcttcttaatctatgtggaaaagaaaaatatatgtattcgcatcaactggacaatggca
acaacacttgttgtacttagaagcataactgattttgtgtatttattgaacattcttctc
cagtttaggttggcttatgtttctcctgagtctagggtggttggtgctggagatttaatt
gaccatcccacgaaaattgctcttaattattttaagggttattttttcttcgatttattt
gttgtatcacctcttcctcaggtaatgatattgtttgtcctaccaacttccttggggtca
tcaggagcaaattatgttaagaaccttctacgcctagcgattcttgtacaatatattccc
cgattattcagatttttgcctctgctaattggccagtctccaaccggattcatatttgag
tcagcctgggcaaatttcataataaatcttctcatttttatgctatccggccatgttgtt
gggtcatgctggtatctctttggtctacagcgggttaaccaatgtttgcgtgatgcctgc
catcgtgctaatctacctagatgcatggatttgattgactgtgattttaaaggggggata
tcacctaattgggttaatgataagggtgccaatgcttgtttgaattcctcgtctgatgct
ttttcttatggaatctatacctatgctgtaccacttacaacagaaactagggtgatcaac
aaatatgtgtatgcactgttttggggattccagcaaatcagtactttggctggtaatcaa
gtcccaagctattttgtatgggaagtcctctttacaatgtccatcatcggattgggactc
ttgctttttgcgcttctcattggaaacattcagaactttcttcaagctcttgggcggagg
aggctggaaatgcagcttagaggccgtgatgttgagcaatggatgagtcatcgtcgctta
ccagaacatctcaaaaggagagttcggcaggctgaacggtatagttgggctgcaacaaga
ggtgttcctgaaaaaatggttttggagaatttgccagaagatctcgtgacagacatacga
cgtcatctcttcaaatttgttaaaaaagttcgtattttttccctgatggatgaggatgag
cctatcttagatgccattcgtgagcgattagtacaaacgacatacatcaaaggaagtaga
attttgagtcagggcggtctagtgcagaaaatggtgtttattgtgcgtggaaaattggag
agcattggagaagatggaattccggttccgttaactgaaggggatgcttgtggcgaagag
cttttaagatggtatcttgaacaatcttctgaaagcaaagaaggtaaaaaagtgaaactt
caaggacaagggttgactagtgatagaacagtaagatgtttgactaatgttgaggcattt
tcacttcgctctaaagacattgaagaagtcacaactctttttgcaagattcttgcggagc
cctcgcgttcaaggagtcataaggtatgaatcgccttattggagatcacttgcagcaaac
agaattcaggttgcatggagataccgaaagaagcgtctaagtagagctaataccacacaa
tga
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