Lathyrus oleraceus (garden pea): 127135460
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Entry
127135460 CDS
T08598
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 1
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127135460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psat03019
]
127135460
Messenger RNA biogenesis [BR:
psat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
127135460
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
127135460
NCBI-ProteinID:
XP_050918120
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Position
1:complement(341430205..341431951)
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AA seq
206 aa
AA seq
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MGAEQGENGGSHDSEKVEVNIYPLNSYYFGSKHAVFSKHHSLQRFKSNYAANGMRICVEA
VLMVELFKHPHLLLLQIKNSIFKLPGGRLRPGESDTDGLKRKLGKKLSLDEDEAQWEVGE
CLGMWWRSDFETLMHPFLPPNVKHPKECTKLFLVKLPETRRFTVPKNMKLLSVPLCQIRE
NHKLYGPIISAVPQLLSKFSFKMIGI
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcagagcaaggtgaaaacggaggaagccatgattctgagaaggtggaagttaac
atatatcctttgaattcttactattttggatccaaacatgccgttttttccaaacatcac
tcccttcaaagattcaaatccaactatgctgcaaatggaatgcgaatttgtgtggaagct
gttctaatggttgagttgttcaaacatcctcatttgctgctcttgcaaattaaaaattcc
atctttaaacttcccggtggccgtttgaggccaggtgaatcagatactgatggattgaag
cgcaagctgggaaagaagctttctcttgatgaagatgaggcacagtgggaggtaggagag
tgtcttggaatgtggtggaggtctgattttgaaacattgatgcaccctttcttaccacct
aatgtcaaacatcccaaggagtgtacaaaactcttccttgtaaagcttccagaaactcga
aggttcaccgtgccaaagaacatgaagttgctttcggttccattgtgtcaaattcgtgaa
aatcataagttatacgggccaattatatctgcggtcccgcagctactctcaaagttctct
ttcaaaatgatcggaatttaa
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