Pisum sativum (pea): 127135602
Help
Entry
127135602 CDS
T08598
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
psat
Pisum sativum (pea)
Pathway
psat03030
DNA replication
psat03420
Nucleotide excision repair
psat03430
Mismatch repair
psat03440
Homologous recombination
psat03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127135602
03420 Nucleotide excision repair
127135602
03430 Mismatch repair
127135602
03440 Homologous recombination
127135602
03460 Fanconi anemia pathway
127135602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psat03000
]
127135602
03032 DNA replication proteins [BR:
psat03032
]
127135602
03400 DNA repair and recombination proteins [BR:
psat03400
]
127135602
Transcription factors [BR:
psat03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
127135602
DNA replication proteins [BR:
psat03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
127135602
DNA repair and recombination proteins [BR:
psat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
127135602
MMR (mismatch excision repair)
127135602
DSBR (double strand breaks repair)
HR (homologous recombination)
127135602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF936
DUF223
BRCA-2_OB1
Motif
Other DBs
NCBI-GeneID:
127135602
NCBI-ProteinID:
XP_050918223
LinkDB
All DBs
Position
1:complement(343577052..343581015)
Genome browser
AA seq
637 aa
AA seq
DB search
MSVNLTANAIPAIINGDVNAKPLLQILEISSVISNKNSQQQRYRVLLSDAVSSHHAMLAA
QLNDLVTTGRVKNGSIVQLLDYICTLFQNRKIIMVLNMESIIPDCEIIGSPKPFVDSELP
VQKALRDNTVGSSINNNNNNNYNNNSNILANQNTGSTNVQNFRPTIQPSYKPPPVYKGRG
AVMKNEAPARTIPIAALNPYQGRWAIRARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGE
IRVTCFNAIVDRFYDTIEVGKVYLISKGNLKPAQKNFNHLKNEWEIMLDLNSTVELCPDE
DGSIPKQQFSFRPISDIENVESNAILDVIGVVTSVNPSVPILRKNGMETLRRILNLKDNS
GRSVELTLWGEFCNREGQKLQEMVDAGVFPILAVKAGKVNEFSGKSIGSISTTQLFINPD
FPEAQSLRAWFDQVGKDSASLSISKDITHGGPKNEIRKTVSQIRDEGLGRSDKPDWITIR
ATISFMKTDTFCYTACPLMIGDRQCNKKVTRSGDTRWQCDRCNQEFEECDYRYLLQAQIQ
DHTGLTWVTAFQEGGEEIMGYPAKELYALKYEQEDDERFGDIVKSRLFNHFVFRLKIKEE
LYGEEQKVKSTVVKADKVNYSAESRYMLDLISKFGRK
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgaatctcacggcgaacgctattccagcgataatcaacggcgacgttaacgcc
aaaccgttgctacaaattctcgagatttcatcagtcataagtaacaaaaactctcagcag
cagagataccgcgtccttctctccgacgccgtttcatctcaccacgctatgctcgctgct
caactcaacgacctagttaccaccggacgtgttaagaatggctccatcgttcagcttctc
gattacatatgcactcttttccagaatcgcaagattattatggtcctcaacatggaatcc
ataatacctgattgtgagatcattggaagtccaaagccatttgtggattcagaattacca
gttcagaaagcattgcgtgataacactgtggggagttcgatcaacaacaataataataac
aattataataataatagtaatattttggctaatcaaaatacaggtagtactaatgtgcag
aatttcaggccaacaattcaaccttcatacaaacctcctccggtttacaaaggccgtggt
gctgttatgaaaaacgaggcgccggcacgtacaataccgatagctgctttaaatccatat
caaggtaggtgggcaatcagggcaagagttactgctaaaggcgatttgcgccggtataac
aatgctcgtggagatggaaaagtcttctcgtttgatctccttgattctgatggtggtgaa
atccgcgtaacatgctttaatgctattgttgaccgcttctatgatacaattgaggttggc
aaagtatacttgatatccaaaggtaacttgaaacctgcacagaagaatttcaaccatttg
aagaatgaatgggaaattatgctggatttgaattccacagttgagctttgcccagatgag
gatggttctatacctaaacagcaattctccttcaggcctatcagtgacattgagaatgtc
gagagtaatgctatccttgatgttattggggttgtgacatctgtgaatccttcagttccc
atcttaaggaagaatggaatggaaacgctgagaaggattttgaatctgaaggacaattct
ggcaggagtgttgagctaacactttggggtgaattttgtaacagggaaggacaaaagctg
caagagatggtagatgctggtgttttccccattttggcagtaaaggctgggaaagtgaat
gaattcagtggaaagtctataggctctatttccactactcagcttttcataaatccagat
ttccctgaggctcaaagcttacgagcctggtttgatcaagttggaaaagattctgcttct
ctatccatttctaaggacattactcatggaggaccgaagaatgagatacgcaaaactgtg
tctcaaatcagagatgaaggtctgggacgttcagacaagccggactggataacaataagg
gcaaccatatcattcatgaagactgatacattctgttacacagcttgccctctaatgatt
ggagatcgacaatgcaataagaaagtgacaaggtcaggagacacaagatggcaatgtgat
agatgcaaccaggaatttgaggaatgcgattatcgttaccttctccaagctcaaattcag
gatcatactggattaacttgggtaactgctttccaggaaggaggagaagagattatggga
tacccagcaaaagagctgtatgcactgaagtatgaacaggaggatgatgaaaggtttggg
gatatagtcaagagtagactcttcaatcactttgtatttaggctgaaaatcaaagaggag
ttatatggggaagaacagaaggtgaagagcacagtagttaaggcagataaggtgaattat
tctgcagagagtagatacatgcttgatttgatttccaagttcggtaggaagtaa
DBGET
integrated database retrieval system
