Lathyrus oleraceus (garden pea): 127136535
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Entry
127136535 CDS
T08598
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat03082
ATP-dependent chromatin remodeling
psat03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127136535
03083 Polycomb repressive complex
127136535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psat03036
]
127136535
Chromosome and associated proteins [BR:
psat03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
127136535
Histone modification proteins
HAT complexes
HATB complex
127136535
HDAC complexes
Sin3A-HDAC complex
127136535
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
127136535
PRC2.2
127136535
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
127136535
Heterochromatin formation proteins
Other heterochromatin formation proteins
127136535
Chromatin remodeling factors
NuRD complex
127136535
NuRF complex
127136535
NuRF complex (fruit fly)
127136535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
eIF2A
EIF3I
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_IP5PC_F
TFIIA
Motif
Other DBs
NCBI-GeneID:
127136535
NCBI-ProteinID:
XP_050919041
LinkDB
All DBs
Position
1:complement(361172776..361182245)
Genome browser
AA seq
515 aa
AA seq
DB search
METPPSQQGVVKKKETRGRKPKPKDDQQQTPAKTLKEAKKAQLQQQQQQQLQQQQQQQQH
QASVDEKYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS
VPNTLVIANCEVVKTRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIV
ATHTDSPDVLIWDVESQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGK
DKTVVLWSIEDHVTSAATDKSGGSIIKPNSKSGEGNDKTVDSPSVGPRGIYSGHDDTVED
VAFCPSSAQEFCSVGDDSCLILWDARVGSSPVVKVEKAHNADLHCVDWNPHDDNLILTGS
ADNSVRLFDRRNLTSNGVGSPIHKFEAHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYE
KVGKKIERAGKTINSPPGLFFQHAGHRDKVVDFHWNAYDPWTIVSVSDDCESTGGGGTLQ
IWRMSDLLYRPEDEVLAELEKFKSHVVACAAKTDT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggagactcctccgtcgcagcaaggcgtagtaaagaagaaggaaactcgaggtcgaaaa
cctaaaccaaaagacgatcaacaacaaacacctgccaaaacactgaaagaagcgaaaaag
gcgcaactacaacagcagcaacaacagcaactgcagcaacagcagcaacaacaacaacac
caagcttcggtagacgagaaatacactcaatggaagtctctcgttcccgttctctacgat
tggcttgcgaatcataaccttgtttggccttctctctcttgcaggtggggtcctcagctt
gaacaagctacttataagaatcggcagcggctttatctttctgagcagactgatggtagt
gtcccaaatactttggtgattgcgaattgtgaggttgtgaaaactagggttgcagctgca
gagcatatttcacagtttaatgaggaggctcgctctccatttgttaagaagtacaagacc
atcatacatcccggggaggtgaacagaattagggaattgccgcaaaattctaagatagtg
gctactcacacagacagccctgatgttctcatttgggatgttgaaagtcaacctaaccgt
cacgctgtccttggagccacaaactctcgtccagatttgatattgaccggacaccaagac
aatgctgagtttgctcttgcgatgtgcccaactgagccttatgtcctttcaggaggaaaa
gataaaacagtggtgttgtggagtattgaagaccatgtaacatctgctgctacggacaag
tctggtggatccattatcaaaccgaactctaaatctggggaaggcaatgacaaaactgtt
gatagcccttctgtcgggccaagaggtatctactctgggcacgatgatactgttgaagat
gtggccttttgcccttctagtgcgcaggaattctgtagtgttggagatgattcttgtctc
atattatgggatgcacgtgttggctctagtcctgttgttaaggttgaaaaagctcataat
gccgatcttcactgtgttgactggaatccccatgatgataatctgattcttactgggtcg
gcagataattctgttcgcttgtttgatcggcgcaatctcacctctaatggggttgggtct
cctattcataaatttgaggctcataaagctgccgttctttgtgttcagtggtctccagac
aaatcatctgtatttggaagttcagcagaagacggtctcttaaacatttgggattatgag
aaggttggtaaaaagattgagcgagctggaaaaacaataaactctcctccagggttgttt
ttccaacatgctggtcatagagacaaagttgttgacttccattggaatgcttatgatcca
tggacaattgtaagtgtgtctgatgattgtgaaagtactggtggaggaggaacattgcag
atatggcgcatgagtgatttgctctatagaccagaggatgaggttttggcagagttggag
aaattcaaatctcacgtggtggcttgtgctgcaaagaccgatacataa
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