Lathyrus oleraceus (garden pea): 127137876
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Entry
127137876 CDS
T08598
Name
(RefSeq) eukaryotic initiation factor 4A-3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat03013
Nucleocytoplasmic transport
psat03015
mRNA surveillance pathway
psat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127137876
09122 Translation
03013 Nucleocytoplasmic transport
127137876
03015 mRNA surveillance pathway
127137876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psat03019
]
127137876
03041 Spliceosome [BR:
psat03041
]
127137876
03009 Ribosome biogenesis [BR:
psat03009
]
127137876
03012 Translation factors [BR:
psat03012
]
127137876
Enzymes [BR:
psat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127137876
Messenger RNA biogenesis [BR:
psat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127137876
mRNA cycle factors
Stress granule specific factors
127137876
Spliceosome [BR:
psat03041
]
Complex C
Other components
EJC/TREX
127137876
Ribosome biogenesis [BR:
psat03009
]
Eukaryotic type
90S particles
Helicases
127137876
Translation factors [BR:
psat03012
]
Eukaryotic type
Initiation factors
eIF-4
127137876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
NAT10_TcmA_helicase
CMS1
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
127137876
NCBI-ProteinID:
XP_050920251
LinkDB
All DBs
Position
1:378310550..378314686
Genome browser
AA seq
406 aa
AA seq
DB search
MATTSVVPANRRRTVISNEDMDFETTEGVKAIATFEGMGIKEDLLRGIYAYGFEKPSAIQ
QRAVAPIIQGRDVIAQAQSGTGKTSMIALTVCQVVDTSVREVQALIVSPTRELATQTEKV
ILAIGDHINIQAHACIGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLV
LDESDEMLSRGFKDQIYDVYRYLPPDLQVCLISATLPHEILEMTNKFMTDPVRILVKRDE
LTLEGIKQFFVAVEKEDWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRNNNFTVS
SMHGDMPQKERDAIMGEFRAGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRI
GRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNIGDLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaacttctgtggtgccggcaaatcgtcggcgaacggttatctccaatgaggat
atggactttgagacgacggaaggtgtgaaggcgattgcgaccttcgaagggatggggata
aaagaagatttgctgcgtggaatctacgcatacggtttcgagaaaccatcggcgattcaa
cagcgtgccgttgcgcctatcattcagggacgtgatgttattgctcaagctcaatctgga
accggaaagacgtccatgattgcgcttactgtttgccaggttgttgatacatccgtcaga
gaagtgcaagctttaattgtgtctccaacaagagaattggccacacagactgaaaaagtt
atattggctattggagatcatattaatatacaagcacatgcttgcattggaggcaaaagt
gtgggagaagatattaggaaacttgagcatggagttcacgtggtgtctggaactcctggg
cgagtctgtgacatgataaaaaggagaacattgcgtacaagagctatcaagttactagtt
ctggatgagtctgatgaaatgttgagcagaggatttaaagatcaaatttatgatgtgtat
agatatctcccacccgatcttcaggtttgcttgatttctgctacgctacctcatgaaatt
ctggagatgacaaacaagtttatgacagatccagtgaggatccttgtcaaacgtgatgaa
ttgacattggagggcatcaagcaattttttgttgcggttgaaaaggaggattggaagttt
gatactctgtgtgatctttatgatactctcaccatcactcaagctgttatattctgtaac
accaagcgaaaggtggactggttaactgaaaaaatgcgtaacaataatttcactgtctca
tcaatgcacggtgacatgcctcaaaaagaaagagatgcaattatgggagaatttcgtgct
ggaacaacccgagtattgataacaactgatgtttgggctcgtggccttgatgtacaacag
gtttctctagttattaattatgaccttccaaataatcgagagctgtacattcatcggatt
ggtcggtctggacgttttggacgaaagggtgttgcaataaattttgttaaaagcgacgat
atcaagatcttgagagatattgagcagtattatagtacccagattgatgagatgccaatg
aatattggtgatcttatataa
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