Lathyrus oleraceus (garden pea): 127138235
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Entry
127138235 CDS
T08598
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X1
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
psat
Lathyrus oleraceus (garden pea)
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
psat03012
]
127138235
Enzymes [BR:
psat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127138235
Translation factors [BR:
psat03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
127138235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
UBA_DHX29
DEAD
HA2_C
Helicase_C
HA2_N
DSRM_DHX29
nSTAND3
DND1_DSRM
AAA_22
AAA_19
ATPase
dsrm
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
127138235
NCBI-ProteinID:
XP_050920587
LinkDB
All DBs
Position
4:353246..401699
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AA seq
1447 aa
AA seq
DB search
MAPKKNQKQSRKGPQSSSSSAPKLQISAENENRLRRLLLNSSRPTPAADDTLTKDQKAKK
LKAVYEKLSCEGFTDHHIELALSALKDSTTFESALDWLCLNLPGTELPLKFSTGTSSHYN
QGGSVGVILNQHHSSTSLPDPSITTTKDQLLESPILIKRHLNNDTLDSCQSSQADWIRQY
VEQQEQDDQNTSWEDDPFYENSAANKLREPRPYDVIAKEYLAARLEATKAKEKRDKKQQE
QAGLIIRKLKEELSALGLSDENLALEYEQISTNHASERASMGHEPLTEEATGDGESDSAI
ILPSNGEAINGGAVELPNVEENLASSCLPAAHVEKDSAQEVAEDIELGGFFLENVPSNEI
HSDILKAQKLEKIKRLSEKNLDKLDGIWKKGDPQKVPKAILHQLCQKSGWEAPKFNKILG
RGKSFSYTVSILRKASGRGKNRKAGGLVTLKLPDQNEIFQSAEDAQNKVAAYALSQLFSD
VPIHLVITEPYASVFMKWMEGESLTKLEDNMEDHKSRFVESLLSGDGSAETASADVIDDN
FPQNISRLDENKSSTTEIHQSFAQRGTYIKELENANLRQVQYTKMGSQRYQDMLNFRATL
PIATLKGDILQMLKENDVLVVCGETGSGKTTQVPQFILDEMIESGHGGQCNIICTQPRRI
AAISVAERVADERCEPSPGSDGSLIGYQVRLDSARNEKTRLLFCTTGILLRKLMGNRSLT
GITHIIVDEVHERSLLGDFILIVLKNLIERQSSEGSSKVKVILMSATVDSSLFSKYFGHC
PVVTAEGRTHPVTTYFLEDIYDQINYRLASDSPASLANETFSKGQNLQRASVTNSRGKKN
LVLSAWGDESLLSEEHCNPHFVPSYYQSFSEQAQKNLKKVNEDVIDYDLIEDLICYIDES
CGEGAILVFLPGVFEINHLHDKLAASYQFGGPSSDWLIPLHSSVASTEQKKVFLRPPGNI
RKVVIATNIAETSITIDDVIYVIDCGKHKENRYNPQKKLSSMVEDWISQANARQRQGRAG
RVKPGICFRLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKLLCLGFIKSFLSMALEPPK
IEAIDSAMSLLYEVGALEGDEELTPLGHHLAKLPVDVLIGKMMVYGAIFGCLSPILSVSA
FLSYKSPFVYPKDERQNVERAKLILLNEKQDGPGDVNDVDKQSDHLLMMIAYKRWETILN
EKGGKAAQQFCNSYFLSSPVMFMIREMRIQFGTLLADIGLITLPKFNQVDGKRIGSLDRW
LSDVSQPFNMYAHHSSILKAILCAGLYPNVAAGEQGIVATALSSLKRSPSSVNSSRTFWF
DGRREVHLHPSSINSNTKVFKHPFLVFLEKVETNKIFLRDTSVISPYSILLFGGSINVQH
QTGLVIIDGWLKLNAPAQIAVLFKELRLALHSILKELIRKPENVIVLNDEIIKSIINLLL
EEGSVPK
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgaaaaagaatcagaaacagagcagaaagggtcctcagtcatcctcttcatca
gcccccaagttacaaatttccgctgaaaacgagaaccgcctccgccgcctcttgctcaac
tcttcccgccccacccccgcggccgacgataccctaacaaaggatcagaaagcgaagaag
ctcaaagctgtttacgagaaactctcttgcgaaggattcaccgatcatcacattgaactc
gctctctccgctctcaaggattctactacatttgaatcagctcttgattggttatgcctc
aatttgcccggaactgaacttccactcaagttttccaccgggacttcctctcattataat
caagggggttctgttggtgttatattaaaccaacatcactcttcaacttccttaccggat
ccatctatcacaacaactaaggaccaacttctagaatctcccatcttaatcaagagacac
ttgaataatgatactttagattcttgccaatcatctcaagccgattggattaggcaatac
gtcgagcagcaggaacaagatgatcaaaatacgtcttgggaagatgatcctttttacgaa
aatagtgctgcaaacaagctccgtgaacctaggccttatgatgttattgccaaggagtat
cttgctgcaagattagaagctacaaaggcaaaggagaaaagggacaaaaaacaacaggag
caggcaggccttatcatacggaaactgaaagaggagttgtctgctctaggattatcagat
gaaaatttggcattagaatacgagcaaatcagtactaaccatgcatctgagagagcatcc
atgggccatgagcctttgacagaagaagcaacaggtgatggagaaagtgattcagccatt
attttgccttctaacggggaagcaataaatggaggtgctgtggagcttcctaacgtggag
gaaaatcttgctagttcttgcttgccagctgctcatgttgaaaaagattctgcacaagaa
gtggccgaagacattgagcttggcggtttcttcttggagaatgtgccgtctaatgaaata
cactctgatattttgaaagcacagaaactagaaaaaatcaaaagattatctgagaagaac
ttggataagttagatggcatttggaagaagggagaccctcaaaaggttccaaaggctatt
cttcatcagctatgccagaaatcaggatgggaagctccaaaattcaataaaatacttggc
agaggaaagagtttttcctatactgtaagcatattgcgtaaagctagtgggaggggaaag
aatcgaaaagccggggggctggtaacacttaagcttccagatcagaatgaaatctttcaa
tctgcagaggacgcacagaataaagtggctgcatatgctttgtcccaactattttctgat
gtcccaattcatctcgtgattactgagccttatgcgtcagtttttatgaagtggatggaa
ggggaatcgctaaccaaactagaagacaacatggaagatcacaagtctcgttttgtggag
tcattattaagtggtgatggttctgctgaaactgcatctgctgatgttatagacgataat
tttcctcaaaacatcagtagacttgatgaaaataaaagttcaaccactgaaattcatcaa
tcatttgcgcagagaggaacctatattaaggaattggagaatgctaatttgagacaggtg
caatacactaaaatggggtcgcaaagataccaggatatgttgaattttagagctacactt
cctattgccacacttaagggtgatatattgcaaatgctaaaggaaaatgatgttcttgtt
gtttgtggggaaacaggctctggaaaaacaactcaggttccacaattcatattggatgag
atgattgagtcaggacatggtggacagtgtaatattatttgcactcaaccaaggagaata
gcggctatttccgtggctgaaagggtagctgatgagcggtgtgaaccttcaccaggttcc
gatggctccttgattggttatcaagtccgtcttgatagtgccaggaatgagaaaacaagg
cttctgttctgtacaacaggcatccttctgagaaaattgatggggaaccgaagcttgacg
ggtattactcatatcatagttgatgaagttcatgagagatccttattgggtgattttatt
ctaattgtattaaagaatctaattgagaggcagtctagtgaaggctcttcaaaagtcaaa
gtcattctaatgtcagcaactgtggattcaagtttattttcaaaatacttcggtcattgc
cctgtggttactgcagaaggcaggactcatccagtgacaacatactttcttgaggatata
tatgatcagattaattatagacttgcttcagattcaccagcttctttagcaaatgaaaca
ttttctaaaggacagaacttgcagagagcgtctgtgacaaacagcagggggaagaagaat
ctagtcttatctgcatggggtgatgagtctttgctctctgaagaacattgtaatccacat
tttgttcccagttattatcagtcattcagtgaacaagcccaaaaaaatctgaaaaaagtg
aatgaggatgtcattgattacgatcttattgaagatctgatatgttacattgatgaaagt
tgtggtgagggtgccatccttgtcttcttaccgggagtgtttgagataaaccacttacat
gataagttagcagcgtcataccagtttggtgggccatcttctgattggcttattcctttg
cattcatcagttgcgtcaactgaacagaaaaaggtttttttacgccctccaggaaatata
cgcaaggttgttatagcaacaaatatagcagagaccagcataacaatagatgatgtgata
tatgtgattgactgtggaaaacataaggagaatcgttataatccgcagaagaaattgtct
agcatggttgaagattggatttctcaagcaaatgcaaggcagcgtcagggtagagctgga
cgtgtgaaacctggaatatgctttcgcttgtacactcgttatagatttgaaaaactcatg
cgtccttatcaggtcccagagatgcttcgaatgccattagttgaattgtgtctgcagatt
aagttactatgtctcggatttatcaaatcgtttttgtctatggctttagaacctccgaaa
attgaagcaattgattcggcaatgtcattattgtatgaggtcggtgctcttgagggggat
gaagagttgacacctcttgggcatcatctggcaaaactacctgttgatgtattaattggg
aagatgatggtgtatggtgcaatttttggctgcttgtcacctattctttcagtttccgca
tttttaagttacaagtctccatttgtgtatcctaaggatgagaggcagaatgttgaaaga
gcaaaactaatattgttgaatgaaaagcaagatgggcctggtgacgtaaatgatgttgat
aagcaatctgatcatttacttatgatgatagcttacaaaagatgggagactattttgaat
gagaaaggaggtaaagctgcacagcaattctgcaattcatattttctgagcagcccagta
atgtttatgataagggagatgaggatacagtttggaactttactagcagacattggtctg
attactcttccaaaatttaatcaggtggatggcaaaaggatagggagtcttgacaggtgg
ctttccgatgtatcacaaccatttaatatgtatgcacatcactcttcgattctgaaggct
atactatgtgcaggtttataccctaatgtggcagctggtgaacaaggtattgttgcaact
gctctcagcagccttaagcggtctcctagctctgtgaattctagtcgtacattctggttt
gatggaagaagagaagttcatctccacccatcttctatcaacagtaacacaaaagtattc
aagcacccttttcttgtcttccttgaaaaggttgagacgaacaaaatatttctaagagat
acttcagtcatttctccatactcaattttgctctttggagggtcaatcaatgttcagcat
cagactggactggtcatcatcgatggatggttaaaattgaatgcacctgcccaaatagct
gtcttgttcaaggagctacgattggctctacattcaattctgaaggagcttattagaaaa
ccagagaatgtaatcgttctaaatgacgagatcattaagtctatcatcaatctgctttta
gaagaaggcagtgtgcctaaatga
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integrated database retrieval system
