Lathyrus oleraceus (garden pea): 127138436
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Entry
127138436 CDS
T08598
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5
KO
K05391
cyclic nucleotide gated channel, plant
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
127138436
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psat04040
]
127138436
Ion channels [BR:
psat04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
127138436
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
127138436
NCBI-ProteinID:
XP_050920845
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Position
4:complement(16088468..16095664)
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AA seq
735 aa
AA seq
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MFDRGDFKSQYMGGQRESSFRWDVLDSRLSSSSDVRVTKSAFGIDKLSHGNHGSGTTSRS
FKKGMRKGSEGLKSIGRSLGLGVSRAVFPEDLKVSEKKIFDPQDKFLLSWNKLFVISCIL
SVSVDPLFFYLPVINDQLHCLGIDRKLATTVTTLRTIIDAFYLIHMALQFRTAYIAPSSR
VFGRGELVIDSAQIAKRYLRRYFIIDFLSVLPIPQIVVWRFLQRSKSSDVLATKQALLFI
ILLQYIPRFLRMVPLTSELKRTAGVFAETAWAGAAYYLMLYMLASHIVGSFWYLLAIERN
DSCWQKACSDNGCIKNYLYCENQHTEGYSDWQNKSKAIFKSRCSVDDNPPPFDYGIFTQA
LSSGIISSKKFISKYCYCLWWGLQNLSTLGQGLQTSTYPGEVIFSIALAIAGLILFALLI
GNMQTYLQSLTLRLEEMRVKRRDSEQWMHHRLLPKELRERVRRYDQYKWLATRGVDEDVL
VQSLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLVTENTYIVREGDPV
DEMLFIIRGRLESVTTDGGRSGFFNRSLLKEADFCGEELLTWALDPKSGSNLPTSTRTVK
ALTEVETFALTADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYCKKK
IMKLRQKEEEEADESEGTQGNSGGSSSSLGAALLASKFAARTLRGVHRNRLAKTARELVK
LQKPPEPDFTADDAD
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaccgtggtgatttcaaatcacagtacatgggtggccagcgagaaagctctttt
aggtgggatgtcttggattctagactttcttcatcttcggatgtcagagttacaaaatct
gcatttggtattgataaattaagccatggtaatcatggaagcggcaccacctctaggtct
tttaaaaaaggaatgagaaagggatctgaaggattgaagtcaattggtcgatcgcttgga
ctgggggtatctagggcggtgtttccagaagatcttaaagtgtccgaaaagaagatattt
gatccccaagacaaatttttactctcttggaataaattatttgttatctcatgcattttg
tctgtgtctgtggatccactgtttttttatctccctgttatcaatgatcaattacactgt
ctgggtatcgacagaaagttggcgacaacagtcaccaccttgaggacaatcattgatgct
ttctatcttatacacatggctcttcaatttcgtactgcttacattgctccatcatctcgt
gtctttgggcggggtgagcttgtgatagattcagcacagatagccaagcgatacctgcga
cgatatttcatcattgatttcctatctgtgttgccgataccacagattgttgtttggaga
tttcttcagaggtcaaaaagttcagatgtactagcaacaaagcaggcattgctgttcatt
atattgcttcagtacattcctagatttcttcgaatggtaccattaacttcagaacttaag
agaacagctggtgtctttgctgaaactgcatgggcaggtgctgcatattatttgatgtta
tacatgcttgccagtcatatagttggttctttttggtacttgttagctattgaacgcaat
gactcgtgctggcagaaagcttgcagtgacaatggatgcattaaaaactacctgtattgt
gagaaccagcacacagaaggttatagtgactggcaaaataaaagcaaagctatttttaag
tcaaggtgctctgtagatgataatcctcccccttttgattatggaatttttacgcaagcc
ttgtcgtctggtatcatttcatctaagaagttcatctcaaaatattgttattgtttatgg
tgggggctccaaaatttaagtacccttggtcaggggcttcaaactagcacctatcctggg
gaggttatcttttcaatagcactggccatagcaggtctcatcctcttcgcacttctgatt
ggcaacatgcagacatatcttcagtcccttacccttaggcttgaggaaatgagagtcaaa
aggcgggattcagaacaatggatgcaccatcgcttgctcccaaaagagcttagagagcgt
gtgagacggtatgatcaatataagtggttggcaacacgtggagtagatgaagatgtttta
gttcaaagtctaccaaaggatcttcgaagagatattaagcgtcatctctgtttggcttta
gtgaggagggttccactatttgagagtatggatgagagattgcttgatgccatatgtgag
agactgaaaccatgcttagttacagagaatacttatattgttcgggaaggagatccagtt
gatgagatgcttttcatcatacgtggacgccttgagagtgttactacagatggtggcagg
agtggttttttcaaccgcagtcttctaaaagaggctgacttctgtggagaggagctttta
acctgggcactggatcccaaatctggttctaatcttccaacttctactcgaactgttaag
gcattaacagaggttgagacttttgccttgactgccgatgagctcaaatttgtcgctagt
cagtttaggcgtcttcacagtagacaggttcagcacacttttcgtttttactctcagcaa
tggagaacttgggctgcatgctttattcaagcagcatggcgcagatattgtaaaaagaaa
attatgaagcttcgtcaaaaggaagaagaagaagcagacgagtcagaaggaactcaaggc
aactctggcggcagttcctctagccttggtgctgccttattggcctcaaagtttgccgca
cgcactctacgaggtgtacaccgcaatcgacttgccaagactgccagggagttggtgaaa
ttacagaaacccccggagccggactttacagcagatgatgcagactaa
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