Lathyrus oleraceus (garden pea): 127138648
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Entry
127138648 CDS
T08598
Name
(RefSeq) THO complex subunit 6
KO
K13175
THO complex subunit 6
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat03013
Nucleocytoplasmic transport
psat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127138648
09122 Translation
03013 Nucleocytoplasmic transport
127138648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psat03019
]
127138648
03041 Spliceosome [BR:
psat03041
]
127138648
Messenger RNA biogenesis [BR:
psat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
127138648
Spliceosome [BR:
psat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
127138648
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR41
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
WDR55
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_NOL10_N
Beta-prop_ACSF4
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
127138648
NCBI-ProteinID:
XP_050921090
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All DBs
Position
4:complement(34414213..34420218)
Genome browser
AA seq
380 aa
AA seq
DB search
MLGDATNWNEDEYRETVLKEREIQTQTVFRTAWSPSQSQSQTQTPNLNSLIVASSDGSIA
SYSISSTVSASKLKNPFGFINADTDNLLAEPDCFFQAHDGSAYDVKFYGDDDNALLLSCG
DDGRVRGWRWKELASSKYHITSEGNNIKPVFDVVNPQHKGPWGSLSPLPENNAIAVNTRA
GSVFAASGDSCAYCWDVETGKLKTVFKGHSDYLHCIVARNSSNQIITGSEDGTTRIWDCK
SGKCIQVIDPAKHLKLKGPVSWVGSVALDASESWLACGSGRNISLWNLPASECTLNFITQ
ASVQDMLFDNNQILTVGADPILNRFDMNGAILSQIPCASPSAFSISLHPAGVIAVGGYGC
LVDVISQFGSHMCTFRCQCV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgttgggtgacgccaccaactggaacgaagatgaatacagagaaaccgttttaaaggaa
agagagattcaaacccaaaccgtttttagaactgcttggtctccctctcaatctcaatct
caaactcaaacccctaatctcaactctctcatcgtcgcctccagcgacggttccatcgcc
tcttactccatctcttccaccgtctccgcttctaagctcaaaaatccgtttggttttatc
aatgctgatacggataatttattggcggagccagattgcttttttcaagcgcatgatgga
tctgcgtatgatgtcaaattctatggtgatgatgataatgctctgttgctgagctgcggt
gatgatggccgggttcgaggatggagatggaaggaacttgctagctcaaaatatcatatt
acttcagaaggaaataatatcaagcccgtctttgatgtggtaaatcctcaacacaaaggt
ccttggggttcactctcacctctccctgagaataatgctattgctgttaatactcgggcg
ggatctgtttttgctgcatctggtgattcttgtgcgtattgttgggatgtggaaactggt
aaattaaaaacagtattcaagggtcactctgattacttgcattgtattgttgctcgcaac
tcatccaatcagatcataacaggttcagaggatgggacaacgcggatttgggattgcaaa
agtggaaagtgtatccaagtgattgatccagcaaaacatttgaagttaaaaggacctgtt
tcatgggttggctctgttgctttagatgcaagtgagagttggttggcttgcggtagtgga
cgtaatatatcactttggaaccttcctgcctcagagtgcacattaaattttatcactcaa
gcttctgtacaagacatgttatttgacaataatcaaattctaacagttggtgcagatcct
atactcaatcgctttgacatgaatggggcaatcctctcacaaataccatgtgcttctcca
tcagctttttctatctccttacatccagcaggggttattgcggttggaggttacggatgt
cttgtagatgttatctcgcaatttggcagtcacatgtgcacatttcgttgccaatgtgtt
tag
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integrated database retrieval system