KEGG   Pisum sativum (pea): 127138648
Entry
127138648         CDS       T08598                                 
Name
(RefSeq) THO complex subunit 6
  KO
K13175  THO complex subunit 6
Organism
psat  Pisum sativum (pea)
Pathway
psat03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:psat00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    127138648
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psat03019]
    127138648
   03041 Spliceosome [BR:psat03041]
    127138648
Messenger RNA biogenesis [BR:psat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     127138648
Spliceosome [BR:psat03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    127138648
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd EIF3I WDR55 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_Nup120_160 Beta-prop_IFT122_1st Beta-prop_WDR19_1st
Other DBs
NCBI-GeneID: 127138648
NCBI-ProteinID: XP_050921090
LinkDB
Position
4:complement(34414213..34420218)
AA seq 380 aa
MLGDATNWNEDEYRETVLKEREIQTQTVFRTAWSPSQSQSQTQTPNLNSLIVASSDGSIA
SYSISSTVSASKLKNPFGFINADTDNLLAEPDCFFQAHDGSAYDVKFYGDDDNALLLSCG
DDGRVRGWRWKELASSKYHITSEGNNIKPVFDVVNPQHKGPWGSLSPLPENNAIAVNTRA
GSVFAASGDSCAYCWDVETGKLKTVFKGHSDYLHCIVARNSSNQIITGSEDGTTRIWDCK
SGKCIQVIDPAKHLKLKGPVSWVGSVALDASESWLACGSGRNISLWNLPASECTLNFITQ
ASVQDMLFDNNQILTVGADPILNRFDMNGAILSQIPCASPSAFSISLHPAGVIAVGGYGC
LVDVISQFGSHMCTFRCQCV
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgttgggtgacgccaccaactggaacgaagatgaatacagagaaaccgttttaaaggaa
agagagattcaaacccaaaccgtttttagaactgcttggtctccctctcaatctcaatct
caaactcaaacccctaatctcaactctctcatcgtcgcctccagcgacggttccatcgcc
tcttactccatctcttccaccgtctccgcttctaagctcaaaaatccgtttggttttatc
aatgctgatacggataatttattggcggagccagattgcttttttcaagcgcatgatgga
tctgcgtatgatgtcaaattctatggtgatgatgataatgctctgttgctgagctgcggt
gatgatggccgggttcgaggatggagatggaaggaacttgctagctcaaaatatcatatt
acttcagaaggaaataatatcaagcccgtctttgatgtggtaaatcctcaacacaaaggt
ccttggggttcactctcacctctccctgagaataatgctattgctgttaatactcgggcg
ggatctgtttttgctgcatctggtgattcttgtgcgtattgttgggatgtggaaactggt
aaattaaaaacagtattcaagggtcactctgattacttgcattgtattgttgctcgcaac
tcatccaatcagatcataacaggttcagaggatgggacaacgcggatttgggattgcaaa
agtggaaagtgtatccaagtgattgatccagcaaaacatttgaagttaaaaggacctgtt
tcatgggttggctctgttgctttagatgcaagtgagagttggttggcttgcggtagtgga
cgtaatatatcactttggaaccttcctgcctcagagtgcacattaaattttatcactcaa
gcttctgtacaagacatgttatttgacaataatcaaattctaacagttggtgcagatcct
atactcaatcgctttgacatgaatggggcaatcctctcacaaataccatgtgcttctcca
tcagctttttctatctccttacatccagcaggggttattgcggttggaggttacggatgt
cttgtagatgttatctcgcaatttggcagtcacatgtgcacatttcgttgccaatgtgtt
tag

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