KEGG   Lathyrus oleraceus (garden pea): 127138727
Entry
127138727         CDS       T08598                                 
Name
(RefSeq) uncharacterized protein LOC127138727
  KO
K12828  splicing factor 3B subunit 1
Organism
psat  Lathyrus oleraceus (garden pea)
Pathway
psat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127138727
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:psat03041]
    127138727
   03036 Chromosome and associated proteins [BR:psat03036]
    127138727
Spliceosome [BR:psat03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    127138727
 Complex B
    127138727
 Complex C
   U2 SnRNP specific factors
    127138727
Chromosome and associated proteins [BR:psat03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    127138727
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 Cnd1 XMAP215_CLASP_TOG Vac14_Fab1_bd UME Adaptin_N
Other DBs
NCBI-GeneID: 127138727
NCBI-ProteinID: XP_050921185
LinkDB
Position
4:complement(40906366..40912216)
AA seq 1253 aa
MASDDEIEKTQEERKKLEKQLASLTELTFDTDLYGASDKDSYLTSIPATEYDENLDADNE
AARKMPSYTAPKSVLKDMPSAGNDAEETRFGKPQRIIDREDDYRRRRLNQLLSPDRHDAF
AAGEKTPDPSVRTYADIMREEALKREKEETLRAISKKKKEEEEAGPEKAQQQQQKRRNRW
DQSQDEGGAKKAKTSDWDAPDATTPGRWDATPTPGRVIDATPGRRNRWDETPTPGRLVDS
DATPGGVTPGATPGATTWDSTPKLPGMATPTPKRQRSRWDETPATMGSATPLPGATPAGA
YTPGVTPVGGVELATPTPGALQGSFTPEQYNLLRWERDIEERNRPLTDEELDAMFPQEGY
KVLDPPASYVPIRTPARKLLATPTPMGTPLYQIPEENRGQQFDVPKEAPGGLPFMKPEDY
QYFGALLNEENEEELTPDEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREFGAGPLF
NRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYYARVE
GREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLPFLKAVC
QSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLSDENQKVRTITALSLAAL
AEAAAPYGIESFDSVLKPLWKGIRQHRGKVLAAFLKAIGFIIPLMEALYASYYTKEVMLI
LIREFQSPDEEMKKIVLKVVKQCVSTEGVEAEYIRTDILPEFFRNFWVRRMALDRRNYKQ
LVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVTNLGSSDIDPRLEELL
IDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSAKVRQQA
ADLISRIAVVMKQCHEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKSIVNVIGMTKMTP
PIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKK
GIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPA
LMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASA
VKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCL
QGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPSLEDEHSNVYSRSELMMFI
NT seq 3762 nt   +upstreamnt  +downstreamnt
atggcttccgatgacgagattgagaagacgcaagaagagcgcaaaaagttggagaagcaa
ctcgcctctctcactgaactcaccttcgacaccgatctctatggcgcaagcgataaagac
tcatacctcacttcaatccccgctaccgagtacgacgagaatctcgacgcagataacgag
gctgctcgcaaaatgccttcatacaccgcccccaaatccgtcttgaaagacatgccttcc
gccggtaatgatgctgaggagacccgattcggaaagcctcagagaattattgatagggaa
gatgattaccgtaggcgtaggttgaaccagcttctttcgccggataggcatgatgctttt
gctgctggagagaagacgccggatccgtcggtgaggacttatgctgatattatgagagag
gaagcgttgaagagagagaaggaggagactttgagggctatttcgaagaagaagaaggaa
gaggaggaagctggaccggagaaggctcagcagcaacagcagaagaggaggaacaggtgg
gatcaatctcaggatgaaggcggtgctaagaaggctaagacttcggattgggatgctcct
gatgccacgacgccgggccggtgggatgcgactccgacacctgggagagttattgatgct
actccggggaggaggaataggtgggatgagactccgacgccggggaggttggttgattcc
gatgctactcctggcggtgttacacctggcgctacacctggtgcaactacttgggattca
actcctaagttgcctggaatggctactccaactcctaagagacaaagatcaaggtgggat
gaaacgcctgctactatgggaagtgcaactccgttacctggtgctactcctgctggtgct
tatacacctggtgttactcctgttggtggtgttgaattggctactcctactcctggtgct
ttacaaggttcgttcactcccgagcagtataatttgttgaggtgggagagagatattgaa
gagaggaatcgtcctttgactgatgaggagcttgatgctatgtttccacaagaagggtat
aaggttttggaccctcctgcttcttatgtgccaattagaactcctgcaaggaagcttctt
gctacgcctacgcctatggggactccactttatcaaattcccgaagagaatcgtggtcag
cagtttgatgtacccaaggaagctcctggtggtttgcctttcatgaagcctgaggattat
cagtattttggggctttgttgaatgaagaaaatgaagaggaattgactccagatgagcag
aaagagagaaagattatgaagcttctgcttaaagtgaagaacggtacacccccacaaagg
aaaacagctttgaggcagctaactgataaggctcgtgagtttggcgctggacctttgttt
aaccgaattcttccgttgcttatgcaacctactttggaggaccaggaaagacatcttttg
gttaaggtaattgatagagttctttataaattggacgaattggttcgcccttacgtgcat
aagattcttgttgttattgagccccttttgattgatgaagactattatgctcgtgttgag
gggagggaaataatatctaatctcagtaaagctgctggcctggctactatgattgctgcc
atgaggcctgacatagataacattgatgaatatgttaggaatactactgctagagctttc
agtgttgttgcatctgctcttggtatacctgctttattgccattcttgaaggctgtttgt
cagagtaagaaatcttggcaagctcggcacactgggattaagattgtgcagcagattgcc
attttaattggctgcgctgtgttgccccatctgagatctcttgtggaaattatagagcat
ggtttgagtgatgagaatcagaaggtaaggacgatcactgcactgtctcttgccgctctt
gccgaagctgctgctccttatggtattgaaagttttgactcggtgttgaagcctctgtgg
aagggtattaggcaacaccgcggtaaggtgctggctgcgtttttgaaggcaattgggttt
atcattccattgatggaagccttatatgccagctactatactaaggaagtcatgcttatt
ctgattcgggagtttcagtcacccgatgaagaaatgaagaaaattgttctgaaagtggtg
aagcagtgtgtgagcactgagggtgtggaagctgagtatattagaactgatatcctccct
gagtttttcagaaatttctgggttaggaggatggctttggatagaagaaactacaagcaa
cttgtggagacgacagttgagatagcaaacaaggtcggtgttgctgatattgttggaaga
attgttgaagatcttaaagatgagagtgaaccttacaggcgaatggtcatggaaactatt
gaaaaggtcgtcactaacttaggatcatctgatatagatccacggttggaagagcttttg
attgatggtattctttatgccttccaagagcagaccagtgatgatgctaatgtaatgctt
aatgggtttggagcagttgtaaattcactcgggcagagagtaaaaccatatcttcctcag
atttgtggtaccatcaagtggaggttgaacaataaaagtgcaaaggtgaggcagcaagca
gcagacctcatttcgaggattgctgttgtcatgaagcaatgccatgaggaacaattgatg
ggtcatcttggtgttgtcttgtatgagtatcttggagaagagtatccagaagttcttggt
tcaattctgggtgctctcaagtcgattgttaatgttattggtatgacgaagatgactccg
cctattaaggatttgcttcccaggctgactccaatcttgaagaataggcatgagaaagtc
caggagaactgtatcgaccttgtgggtaggattgctgatcgtggggctgagtttgtacct
gccagggaatggatgaggatttgttttgagcttcttgagatgcttaaggcacacaagaag
ggaattcgtagagctactgtcaacactttcggatatattgcgaaagccatcggaccacag
gatgtccttgcaactctattgaataatctcaaagtgcaggagaggcagaatcgtgtatgc
actactgtggccattgctattgttgcagaaacgtgttcaccgttcacagttttgccagca
ctgatgaatgagtatcgtgtgccagagcttaatgtgcaaaatggtgtgctcaagtctctt
tctttcctctttgagtatataggcgaaatgggaaaggactacatctatgctgtgactcct
ttgcttgaggatgctcttatggacagggatttggttcataggcagacagctgcatctgct
gtgaagcacatggcactgggagtggctggtttgggttgtgaggatgcgctggtccatttg
ctgaactatgtctggccaaacatatttgaaacatctccacatgtgataaatgctgtgatg
gaagccattgaagggatgcgggtagccttgggtgctgctgttgttcttaattactgtctc
caaggattgttccaccctgctcgaaaagttagggaagtgtattggaagatttataactca
ctgtatattggagctcaggacgctcttgttgcagcatacccttctctagaggatgagcac
agcaatgtttacagtagatcagagttgatgatgtttatttag

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