Pseudomonas savastanoi pv. savastanoi: PSA3335_00775
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Entry
PSA3335_00775 CDS
T07948
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psav
Pseudomonas savastanoi pv. savastanoi
Pathway
psav03420
Nucleotide excision repair
psav03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PSA3335_00775
03430 Mismatch repair
PSA3335_00775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psav03400
]
PSA3335_00775
Enzymes [BR:
psav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSA3335_00775
DNA repair and recombination proteins [BR:
psav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSA3335_00775
MMR (mismatch excision repair)
Other MMR factors
PSA3335_00775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
Viral_helicase1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ARD09753
UniProt:
A0ABC8B6C9
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All DBs
Position
complement(170677..172860)
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAASLGRQLVLAGAGSGKTRVLVHRIAWLMQVEQASPHSVL
SVTFTNKAAAEMRHRIEQLMGISPAGMWVGTFHGLAHRLLRAHWQEAGLVQTFQILDSDD
QQRLVKRVMRELGLDEQRWPARQAQWFINGQKDEGLRPKHIQASGDLFLTTMKSVYEAYE
VACQRAGVIDFSELLLRALDLWRDNPGLLAHYQRRFRHVLVDEFQDTNAVQYAWLRLLAQ
GGDSLMVVGDDDQSIYGWRGAKIENIHQYSSDFPDTEVIRLEQNYRSTASILKAANGLIV
NNSGRLGKELWTDVGDGELINLYAAFNEHDEARYVVETIESALKTGISRNDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYMRLLEGRGNDAALERVINVPARGI
GEKTVEAIREHARHADVSMWEAMRLLVANKGLTGRAATALGGFIELIENLSAKVMEMPLH
LMTQTVIEQSGLITYHEQEKGEKGQARVENLEELVSAARAFENHESEEDLTPLAAFLGHA
SLEAGDTQAQEHEDSIQLMTLHSAKGLEFAHVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMKQLVMTYAETRRLYGSETYNKVSRFVREIPPALIQEVRLSNSVSRPFGGTP
KFNSSSLFNGTGIPETEFTMGQRVQHAVFGEGVILNFEGAGAQARVQVNFAEGSKWLMMG
YAKLVPL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctctcttcttctgaattccctcaacgatgcccaacgtcaggccgta
gccgcctcattgggtcgtcagttggtcctggctggtgctggctccggcaaaacccgtgtg
ctggtgcatcgcatcgcatggctgatgcaggtcgagcaagcctccccgcattcggttctg
tcggtgacgttcaccaacaaggctgccgccgaaatgcgccaccgcatcgagcagctgatg
ggcatcagccctgctggcatgtgggtgggcaccttccacggtctggcccaccgcctgctg
cgagcgcactggcaggaagccgggctggtgcaaaccttccagattctcgacagcgatgac
cagcagcgcttggtaaaacgcgtgatgcgcgagctgggcctggatgagcaacgctggcct
gcacgtcaggcacagtggttcatcaacggccagaaagatgagggcctgcgcccgaaacat
attcaggccagcggcgatctgttcctgaccaccatgaaaagcgtctacgaagcctacgag
gtcgcctgtcagcgggctggcgtcatcgacttctccgaactgctgctgcgcgcactcgac
ctgtggcgcgataatccgggtttgctcgcgcattatcagcgtcgtttccgccatgtattg
gtggatgaattccaggacaccaacgccgtgcaatacgcgtggctacgcctgctcgctcag
ggtggcgacagcctgatggtggtcggcgacgacgatcagtccatttacggctggcgtggc
gcgaagatcgagaacattcaccagtattcctctgacttcccggacaccgaagtcatccgc
ctggagcagaattaccgctccacagcgagcatcctcaaggccgccaacggcttgatcgtc
aataacagcggccgactgggcaaggagttgtggactgacgtcggcgatggcgagctgatc
aacctgtatgccgctttcaacgaacacgatgaggcgcgctatgtggtcgagaccatcgaa
agcgcgctgaaaaccggcatctcgcgcaacgacatcgccattctgtaccgttccaacgcc
cagtcgcgggtgctggaagaagccctgctgcgcgaacgtattccatatcgcatttacggc
gggcagcgcttcttcgaacgcgccgaaatcaagaacgcgatggcgtatatgcgcttgctg
gaaggtcgtggcaacgatgcagcgctggagcgggtgatcaacgttccggctcgcggcatc
ggcgaaaagaccgtcgaagcgattcgcgaacatgcgcgtcatgccgacgtctccatgtgg
gaagccatgcgcctgctggtcgccaacaagggcctgaccggccgcgccgccacggccctg
ggcgggttcatcgagctgatcgagaacctgtcggcgaaggtcatggagatgccgctgcac
ctgatgacccagacggttatcgagcagtccgggctgatcacctatcacgagcaggaaaaa
ggcgagaaaggccaggcgcgggtagaaaaccttgaggaactggtcagcgcggcccgtgct
ttcgagaatcacgaaagcgaagaagacctgacgccacttgcagcgtttttggggcatgcc
tcgctggaagcaggcgacacccaggcgcaggagcatgaagacagcattcagctgatgacc
ctgcacagcgccaagggcctggagtttgcgcatgtgttcctggtgggcatggaggaaggg
ctgttcccgcacaagatgagtctggaagagccggggcgcctggaagaagagcgacgtctg
gcttatgtcggcatcacccgcgccatgaaacagctggtgatgacctacgccgaaacgcgt
cgtctgtacggcagcgaaacctacaacaaggtctcgcgttttgtacgcgagattccgccg
gcgctgatccaggaagtacgcctgtccaacagcgtgagtcgcccgttcggtggcactccg
aagttcaacagcagcagcctgttcaacggcaccggcattccggaaaccgagttcaccatg
ggccagcgtgtacagcatgcggtgttcggcgaaggcgtgatcctcaacttcgagggcgct
ggcgctcaggcacgggtgcaggtcaacttcgccgaaggcagcaagtggctgatgatgggc
tatgcgaagctggtgccgttgtag
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