Pseudomonas savastanoi pv. savastanoi: PSA3335_01340
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Entry
PSA3335_01340 CDS
T07948
Name
(GenBank) type VI secretion system-associated protein
KO
K11901
type VI secretion system protein ImpB
Organism
psav
Pseudomonas savastanoi pv. savastanoi
Pathway
psav02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psav00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSA3335_01340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psav02044
]
PSA3335_01340
Secretion system [BR:
psav02044
]
Type VI secretion system
Imp/Vas secretion system core components
PSA3335_01340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VipA
Motif
Other DBs
NCBI-ProteinID:
ARD09850
UniProt:
A0ABC8B6P7
LinkDB
All DBs
Position
complement(302727..303260)
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AA seq
177 aa
AA seq
DB search
MAKKESTQHKLDRVRAPRVHITYDVDIGDAQEKKELPFVVGVLGDFSGNPLEPLPKLKDR
KFIFIDRDNFNGVLKGIKPRLAYRVDNTLAKNGTQLGVELNFNALEDFEPQNVVRQVEPL
RKLLEVRNKLADLRNKMGGNDKLEELLMDVLQNTEKLKTLGKEFGREAAVPATDSKE
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaggaaagtacccagcacaaacttgaccgcgttcgcgcgcctcgggtccat
atcacttacgacgttgatatcggcgacgctcaggaaaagaaagagctgccattcgttgta
ggcgttctcggcgatttctccggcaaccccctggagccgctgcccaagctcaaggatcgc
aagttcatcttcatcgatcgcgacaacttcaacggcgtccttaaaggcatcaagccgcgc
ctggcgtatcgcgtcgacaacaccctggccaagaacggtactcagcttggcgtcgaattg
aacttcaatgcgctggaagacttcgagccgcagaacgtcgtgcgtcaggtcgagccgctg
cgcaagctgctggaagtgcgcaacaagctggctgacctgcgtaacaagatgggtggcaac
gacaagcttgaagaactgctgatggacgtgttgcagaacactgaaaagctgaaaaccctg
ggcaaggagttcggccgtgaagccgccgttcctgccaccgacagcaaagagtaa
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