Pseudomonas savastanoi pv. savastanoi: PSA3335_01610
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Entry
PSA3335_01610 CDS
T07948
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psav
Pseudomonas savastanoi pv. savastanoi
Pathway
psav03030
DNA replication
psav03410
Base excision repair
psav03420
Nucleotide excision repair
psav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSA3335_01610
03410 Base excision repair
PSA3335_01610
03420 Nucleotide excision repair
PSA3335_01610
03440 Homologous recombination
PSA3335_01610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psav03032
]
PSA3335_01610
03400 DNA repair and recombination proteins [BR:
psav03400
]
PSA3335_01610
Enzymes [BR:
psav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSA3335_01610
DNA replication proteins [BR:
psav03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PSA3335_01610
DNA repair and recombination proteins [BR:
psav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PSA3335_01610
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSA3335_01610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
DUF2017
Obc1_cap
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
ARD09899
UniProt:
A0ABC8B792
LinkDB
All DBs
Position
361176..363941
Genome browser
AA seq
921 aa
AA seq
DB search
MTQAPLVLIDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRRQYPDSPFAVVFD
AKGGTFRDALYTDYKANRPSMPDDLRVQVDLLHACVKGMGYPLLCVEGVEADDVIGTLAR
SSAAADRPVIISTGDKDMAQLVDGHITLVNTMTGSVLDVAGVKEKFGVGPEHIIDYLALM
GDKVDNIPGVPGVGEKTAVGLLVGVGGGIKELYERLETVATLPIRGAKTLAAKLEEHRAM
AFLSYELATIKIDVPLDIELDQLHCGEPDRDKLMELYAELEFKSWIEDLQRDAKRAGQEL
AVEEPTVEAKEAAYEVILEQSQFDAWLKKLNAAPLFAFVTQSNGTDGQRAQLVGLSFAIQ
THEAAYIPLTHSYMGVPQQLDRDTVLKALKPLLEDPDKTKVGQHAKFAINLLANCALDGD
QTQGIDLQGVRFDTILESYVLDSTATRHDRDSLVAKYLTHTPINFQEIAGKGAKQLTFDQ
IAIEQAGNYAAEEADLTLRLHEVFEARLAAIPTLQPVLNDIEMPLVPVLAGIERQGALVD
ANLLGIQSVELGDKMTALEREAFAIAGEEFNLGSPKQLGVILYEKLGMPILSKTATGQAS
TAEAVLAELAEQDFPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSYHQAVAVTG
RLSSSDPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAQDEGLLHAF
RNDLDVHRATAAEVFGVELENVTTDMRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQAY
VDRYFARYPGVLDYMERTRAQAAEQGFVETIFGRRLYLPDINAKNQSLRKGAERMAINAP
MQGTAADIIKKAMVAVNGWLEESGLDARVILQVHDELVLEVREDLVDQISEQIRPHMSGA
AELAVPLLVEVGVGNNWDEAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagcgccgctcgtcctgatagacggttcctcttacctctatcgcgccttccac
gcactgccaccactgaccacgtccaaaggattgccgacgggcgccgtcaaaggcgtgctc
aacatgctcaaaagcctgcgtcgccagtacccggacagcccgtttgcggtggtcttcgat
gccaagggcgggactttccgcgacgcgctgtataccgattacaaagccaatcggcccagc
atgccggatgacctgcgcgtgcaggtcgatctgctgcatgcttgcgtcaagggcatgggc
tatccgctgctatgcgtggaaggcgttgaagcagacgacgtgatcggcaccctggcgcgc
agcagcgcagcggcggaccgtccggtgatcatctccacaggtgacaaggacatggcgcaa
ctggtcgacggacacatcaccctggtcaacaccatgaccggcagcgtgctggacgtggct
ggcgtgaaagagaagttcggcgtcggtccggagcacatcatcgactacctcgcactgatg
ggcgacaaggtcgacaacatacctggcgtccccggcgtcggcgaaaagactgccgtcggc
ttgctggttggcgtgggcggcggaatcaaggagctttacgaacgcctcgaaacggtcgcg
accctgcctattcgtggggccaagaccctggcggccaagcttgaagagcatcgtgcgatg
gccttcctgtcctatgaactggcaactatcaagatcgacgtgccactggacatcgaactg
gaccagctgcattgcggcgagccggaccgcgacaaattgatggagctgtacgccgagctg
gaattcaaaagctggatcgaagacctgcaacgtgatgccaaacgcgccgggcaggaactg
gccgtcgaagagccaaccgtcgaggcaaaagaagccgcctatgaagtcattctcgagcag
agccagttcgacgcgtggctgaagaaactcaacgccgcgccgctgttcgccttcgtgacc
cagagcaacggcaccgacggccagcgcgcgcaactggtaggtttgtcttttgccattcaa
acccatgaagccgcctacattccgctgacccactcctacatgggggtgccgcagcaactg
gaccgcgacacagtactcaaggcgctcaagccgctgcttgaagacccggataaaaccaag
gtcggtcaacacgccaagttcgctatcaacctgcttgccaactgcgcgctcgacggcgat
cagacccaaggcatcgacctgcagggcgtcaggttcgacaccattctggagtcctacgtt
ctggactccaccgccacccgccacgaccgcgacagcctggtggccaagtacctgacgcac
acgccgatcaacttccaggagatcgccggcaaaggtgccaagcagctgaccttcgaccag
atcgccatcgagcaggctggtaattatgctgccgaagaagccgacctgaccctgcgcctg
catgaagtattcgaagcgcgtctggccgcaattccaaccttgcagccggtcttgaacgac
atcgagatgccgctggtgcccgtccttgcaggcatcgaacgccagggcgcactggtcgat
gccaacctgctgggcatccagagcgtcgaactgggcgacaagatgaccgcgctggagcgc
gaagcctttgccattgccggtgaagagttcaacctgggctcgcccaagcagctcggcgtg
attctctacgaaaagctcggtatgccgatcctcagcaagaccgccaccggccaggcatcg
actgccgaggccgtgctggccgaactcgccgagcaggacttcccgctgcccaaggtactg
atgcaataccgctcgatgagcaagctcaagagcacttacaccgaccgcctgccggagcag
atcaacccgcgcaccggacgcattcacacctcctatcaccaggcagtggcggtgaccggg
cgcttgtcatccagcgatccgaacctgcagaacatcccgatccgtactgctgaaggccga
cgcatccgtcaggcgttcgtggcccccaagggctacaagctgctggcggcagactattcg
cagatcgaactgcgcatcatggcgcatctggcacaggacgaaggcttgctgcatgccttc
cgcaacgacctggacgttcaccgcgcgacggcagcggaagtcttcggcgtcgagctggaa
aacgtcaccacggacatgcgccgcagcgccaaagcgatcaacttcggcctgatctacggc
atgagcgcgtttggcctggccaaacagattggcgtggaccgcaagcagtcacaggcttat
gtcgaccgttacttcgcccgctaccccggcgtgctggattacatggagcgcacacgtgct
caggccgccgagcagggttttgtcgagaccattttcggccgtcgcctgtacttgccggac
atcaacgccaagaaccagtccctgcgcaaaggtgccgaacgcatggcgatcaacgcgccg
atgcaaggcactgcggcggacatcatcaagaaagccatggtggccgtgaatggctggctg
gaagaatccggtctggatgcgcgggtcattctgcaggtgcatgacgaactggtgctggag
gtgcgcgaagacctggtcgatcagatcagtgaacagatccgcccacacatgagtggcgca
gcagaattggcagtgccgctgctggtggaagtcggggtcggcaacaactgggacgaggcg
cactga
DBGET
integrated database retrieval system
