Pseudomonas savastanoi pv. savastanoi: PSA3335_03580
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Entry
PSA3335_03580 CDS
T07948
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
psav
Pseudomonas savastanoi pv. savastanoi
Pathway
psav03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psav00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PSA3335_03580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psav03019
]
PSA3335_03580
03009 Ribosome biogenesis [BR:
psav03009
]
PSA3335_03580
Messenger RNA biogenesis [BR:
psav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PSA3335_03580
Ribosome biogenesis [BR:
psav03009
]
Eukaryotic type
Pre-60S particles
RNases
PSA3335_03580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DHOR
Motif
Other DBs
NCBI-ProteinID:
ARD10230
UniProt:
A0ABC8B7N4
LinkDB
All DBs
Position
781259..781795
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AA seq
178 aa
AA seq
DB search
MQNKQNLIWIDLEMTGLDPDTDVIIEMATIITDSELNTLAEGPVIAVHQSDETLAKMDEW
NTRQHGGSGLTQRVRESTISMAEAEAQTLEFIKLWVPERSSPICGNSICQDRRFLYRHMP
TLENWFHYRNLDVSTLKELAARWSPELKFKKGSTHLALDDIRESIAELRFYREHFIKP
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacaagcagaacctgatctggatcgatctggaaatgaccggtctggaccctgat
accgatgtcatcatcgaaatggccacgatcatcactgatagcgagctgaacaccctggcc
gaaggcccggtgatcgctgtgcaccagagtgacgaaacgctggcgaaaatggacgagtgg
aacacccgccagcacggtggctcgggcctgacccagcgagtacgcgaaagcaccatcagc
atggctgaagccgaggcgcagacccttgagttcatcaagctgtgggtgccggagcgcagt
tcgccgatctgcggcaacagcatctgccaggatcgccgcttcctgtatcgccacatgccg
acgctggaaaactggttccactaccgcaatctggatgtctcgaccctcaaggaactggct
gcgcgctggtcccccgagctgaaattcaagaaaggcagcacccacctggcgctggatgac
atccgcgagtcgattgccgagctgcgcttttatcgtgagcacttcatcaagccttga
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