Pseudomonas savastanoi pv. savastanoi: PSA3335_04195
Help
Entry
PSA3335_04195 CDS
T07948
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
psav
Pseudomonas savastanoi pv. savastanoi
Pathway
psav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSA3335_04195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psav03400
]
PSA3335_04195
Enzymes [BR:
psav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PSA3335_04195
DNA repair and recombination proteins [BR:
psav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSA3335_04195
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_25
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ARD10340
UniProt:
A0ABC8B887
LinkDB
All DBs
Position
919263..922955
Genome browser
AA seq
1230 aa
AA seq
DB search
MNEKSLPLALLFPLRGSQLIEASAGTGKTFTISALYLRLVLGHGTERSGFGRELLPPQIL
VVTFTDAATKELRDRIRTRLAEAARFFRDEIAAPDGLIAELREQFEAEQWPACASRLDIA
AQWMDEAAVSTIHSWCQRMLREHAFDSGSLFTQTLETDHSDLLGEVLRDYWRRFCYPMSG
DALTWVRENLSGPAALLPRVRGLFGRDRSPPTQEPAELIEASLQERRAALAALKAPWAAW
AEELYALCQDAVARKVVDGRKMQERYFKPWFEKLAAWAADDTQETLDLGTGFTRLTPEGV
AEAWKSDPPSHPAFEAMAQLKAALDSLPKPDAAVLQHAAQWVSARFEEERRRRAEMGFDD
MLLRLDAALHGAGGERLATLIREQFPVALIDEFQDTDPVQYRIFDSIYRLEANDEQTGLF
LIGDPKQAIYAFRGADIYTYLRARQATDGRWHTLDTNYRSSHAMVASVNHVFTRAEQRPQ
GRGAFLFRDDQGNQVPFSDALAQGRKETLEVDGAPLTALTVWHLESEQPVSGVIYRQQLA
ASCASEIVRLLNAGQQGRAGFAMLDKPLRGLRPADIAILVRDGKEAQAVRQQLSARGVRS
VYLSDKDSVFAAQEAHDLLSWLKACAEPDSERTLRAALACITLDLPLAELERLNQDELAW
ERRVMQFRGYRAVWRSQGVLPMLRRLLHDFALPQTLMTRTDGERVLTNLLHLSELLQQAA
AELDGEQALVRHLGDHLALSGQAGEEQILRLESDEQLVKVVTIHKSKGLQYPLVFLPFIC
SSKPVDGSRLPLQFHDADGNSQISLQPTEALIQQADDERLAEDLRLLYVALTRSEHACWL
GVADLKRGNASNSMLHRSALGYLLGGGVALAESVELKVWLRDLAQGCDAIALQPVPEPTD
ERFSAPRNEAALVQLLVPKRRAAENWWIASYSALRIGDTVTTGADESPDSPQAQKLFDDE
RLDPEAPRDILTSGGDIHRFPRGPNPGTFLHGLLEWAGNEGFALTAHTPELLRDAVARRC
SRRGWAGWIDTLSDWLQQMLNIPLRLSPDATPVALGELNQPNQYRIEMEFWFASNNVNVA
QMDALVRRFTHNNAPRAATETVSLNGMFKGFIDLTFEHEGRYYVADYKSNWLGTDDTAYT
ELAMETAILDNRYDLQYVLYLLALHRQLKARMADYDYDQHMGGALYLFLRGSRSASQGAY
FTRPPRELIESLDLLFQGKPIAHDLPGALA
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaagtcccttcctctggcgctgctctttccactacgcggcagtcaactgatc
gaggccagcgccgggacgggcaagaccttcaccatctccgccctgtacttgcgcctggtg
cttgggcacggcaccgaacggtcaggctttggtcgtgaattgctgccgccgcagatcctc
gtggtgacctttaccgacgccgctaccaaggagctgcgtgacagaattcgtacccgattg
gcggaagctgcgcggttctttcgtgacgagattgccgcacctgacggtttgattgccgag
ctgcgcgagcagttcgaggccgagcagtggccggcctgtgccagccgtctggacatcgcc
gcacaatggatggacgaagccgccgtctcgacgatccacagctggtgccagcgcatgttg
cgcgaacacgcattcgacagcggcagcctgttcacccaaaccctggaaaccgaccacagc
gatttgctcggtgaagtgctgcgcgactactggcgccgcttctgctaccccatgagcggc
gacgcgttgacttgggtgcgggaaaatctgagcggtccggcggcgttgttgccgcgtgtg
cgaggtttgtttggtcgtgatcgcagcccgcccactcaagagcccgccgaactgatcgag
gcgtcattgcaggagcgccgagcagcgctcgctgccctgaaagcaccttgggccgcctgg
gctgaagagctgtatgcgctctgtcaggacgccgtagcccgcaaagtggtcgatggccgc
aagatgcaggagcgctacttcaagccctggtttgaaaagcttgccgcatgggccgctgac
gacacacaggaaacgctggacctgggaaccggtttcactcgcctgactccggaaggtgtt
gccgaagcctggaaaagtgatccgccttcacatcctgctttcgaggccatggcacagctg
aaagctgcgctggacagcctgcccaagccggatgccgcggtgttgcagcatgcggcgcag
tgggtaagtgcccgctttgaggaagagaggcggcgtcgcgccgagatggggtttgacgac
atgctgctcaggctcgacgcggccctgcatggcgcgggcggcgagcgtctggccaccctg
attcgcgagcagtttccggtggcgttgatcgacgaattccaggacaccgaccctgtccag
taccggatcttcgacagcatctatcgtcttgaggccaacgatgagcagaccgggctgttc
ctgattggcgacccgaagcaggcgatctatgcgtttcgcggtgccgatatctatacgtac
ctgcgcgcccggcaggccaccgatggccgttggcacacgctggacaccaactaccgctcc
agccatgcaatggtcgcgtcggtcaaccatgtcttcacgcgcgcagagcaacgtccgcaa
ggtcgcggagcgtttctgtttcgtgatgatcaaggcaatcaggtgccgttctccgatgcg
ctggcccaagggcgcaaagagaccctggaagtcgacggcgcgccactgactgcactcacg
gtctggcatcttgaaagcgaacagccggtgtccggggttatttatcgccaacagttggcg
gccagttgcgccagcgagatcgtgcgcctgctcaacgccggtcaacagggccgtgccggt
ttcgccatgcttgataaaccgctgcgcgggctgcgtccggccgacattgcgattctggtc
cgcgatggaaaggaagcgcaggcggtgcgtcagcaactcagcgcgcgtggcgtgcgcagt
gtttatctgtcggacaaggactcagtgttcgccgctcaggaggcccacgaccttctgtcc
tggctcaaagcctgtgccgagcccgattcagaacgtacgctgcgtgccgcactggcatgt
atcacgcttgacctgccactggccgagttggagcgtctgaatcaggacgagctggcgtgg
gaacggcgcgtcatgcagttccgtggctatcgtgccgtgtggcgcagccagggcgtcctg
ccaatgctgcgccgcctgctgcacgacttcgccctgccgcagacattgatgacgcgcacc
gacggtgagcgagtactgaccaacctgttgcacttgtctgaactgctgcagcaggccgcc
gccgaactggacggcgaacaggccttggttcggcatctgggcgaccacctggcactgtcc
ggtcaggctggcgaagaacagatcctgcgtctggaaagcgacgagcaactggtcaaggtg
gtgaccatccacaagtccaagggcctgcaatatccgctggtgttcctgccattcatttgc
tcctcgaaacccgtggacggcagtcgcctgccactgcagtttcatgacgccgacggcaac
tcgcagatcagcctgcaacccaccgaagcgctgattcagcaagccgatgacgaacgtctg
gccgaagacctgcgcttgctctacgtggcgctgacccgttccgaacacgcttgctggctg
ggcgttgccgacctcaaacgcggcaatgccagcaactcgatgctgcaccgttcggcgttg
ggttatttgctgggtggcggtgttgcgctggccgagtcggtagagctgaaagtctggctg
cgtgatctcgcgcaaggctgtgatgcgattgccttgcagcctgttcccgagcccactgac
gaacgcttcagtgcgccgcgcaacgaagccgcgctggtccaactgctggtacccaaacgt
cgcgctgccgagaactggtggatcgcctcctacagcgccctgcgtatcggcgacaccgta
accaccggtgccgatgaatcgcctgacagcccgcaggcacagaagctgttcgacgacgag
cgcctggaccctgaagcgccgcgtgacattttgaccagcggcggcgatatccaccgcttt
ccgcgtggccccaatcccggcacctttctgcatggactgctcgaatgggctggcaacgaa
ggttttgcgctaacggcgcacacgcctgaactgctgagagacgccgttgcacgtcgctgc
agccgtcgcggctgggcgggctggatcgacacgctgagcgattggctacagcagatgctg
aacataccgttgcgtctgtcgccggatgccacgccggtcgcgctgggtgagctgaatcag
cccaatcagtaccgcatagagatggagttctggttcgccagcaacaacgtcaatgtggcg
cagatggatgccctggtacgccgcttcacccacaacaacgcgccgcgtgctgcgaccgag
acggtctcgctcaacggcatgttcaaaggctttatcgacctgacgttcgaacacgaaggc
cggtattacgtggctgactacaagtccaactggctgggcaccgacgacactgcgtacacc
gaactggcgatggaaaccgccattctcgacaaccgctacgacctgcaatacgtcctgtac
ctgctggcgttgcatcgtcagctcaaggcacggatggccgactatgattacgaccagcac
atgggcggcgcgctttacctgtttctgcgcggcagtcgttcggcctctcagggagcgtat
tttacacgtccgccacgtgaactgatcgagagtctggacctgctgtttcagggcaaaccg
atagcgcatgacctgccgggagcattggcatga
DBGET
integrated database retrieval system
