Pseudomonas savastanoi pv. savastanoi: PSA3335_04200
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Entry
PSA3335_04200 CDS
T07948
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
psav
Pseudomonas savastanoi pv. savastanoi
Pathway
psav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSA3335_04200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psav03400
]
PSA3335_04200
Enzymes [BR:
psav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PSA3335_04200
DNA repair and recombination proteins [BR:
psav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSA3335_04200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
Helicase_RecD
SH3_13
AAA_22
Viral_helicase1
UvrD-helicase
AAA_16
SLFN-g3_helicase
T2SSE
nSTAND3
PhoH
AAA_17
TraI_hel_assoc_N
DEAD
AAA_28
AAA_5
NTPase_1
NACHT
AAA_18
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ARD10341
UniProt:
A0ABC8B8G1
LinkDB
All DBs
Position
922952..925045
Genome browser
AA seq
697 aa
AA seq
DB search
MSRSFDDLLPTALDDISLAELSPLTRVSDLLILLERWVERGWLRALDKAFVAFLSDLDPH
ADPLVLVAAALTSHQLGHGHVCLDLYETLKEPDFALSLPPEGDQQSAPMLLPSQLLAALD
GAAWCQALAGSMLVAEVGDSSAEARQKPLVLAERRLYLRRYWTYERRIAAALRQRLAQRE
TSPEDLPQQLDALFGPANSSSQAVIDWQKLACALATRKGFSIITGGPGTGKTTTVVRLLA
LLQAPAVQNGQPLRIRLAAPTGKAAARLTESISQQVQSLDVSDDVRQKIPSEVTTVHRLL
GSRPGTRHFRHHAGNLLPLDVLVVDEASMIDLEMMANLLDALPPHARMVLLGDKDQLASV
EAGAVLGDLCRDAEEGFYSPETQAWLEAVSGEDLSKGALRQGDAQHHPLAQQVVMLRHSR
RFGQGSGIGQLARLVNQQQDQQARALLAAGSHDDLFALALKGEQDLKFERLVLDGLGRGE
QGPQGYRHYLNVLAAGRPADDSALDDHCWTRWARLVLSAFDAFQLLCAVRKGPWGVEGLN
QRITHALFNAKLIESEQQWYEGRPVLMTHNDYGLGLMNGDIGITLRLPERDGDGKQVLRV
AFPRNDGSDGVRFVLPSRLNEVETVYAMTVHKSQGSEFAHTALILPEALNPVLTKELIYT
GITRAKHWFSLIEPRQGIFEEALRRKVKRLSGLMLGL
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctcgttcgatgatctgttgcctaccgcgctggacgacatcagcctcgctgag
ttgagcccgctgacgcgtgtcagcgatctgctgatcctgctcgaacgttgggtcgagcgc
ggctggttgcgtgctctggacaaagcgttcgtcgcgttcctcagtgacctcgatccgcac
gccgatccgttggtgctggtggctgcggcgcttaccagccatcagctcggccacggtcac
gtctgccttgacctctacgagaccctcaaagaaccggacttcgccctgtcactgccaccc
gaaggcgatcagcagagcgcgccgatgctgctgccctcacaactgctggcagcactggat
ggcgccgcctggtgccaggcgctggccggcagcatgctggttgccgaggtgggcgattca
agtgccgaagcgcgacaaaaaccgctggtgctggccgagcggcgtctgtacctgcgtcgc
tactggacttacgaacgacgtatcgctgcagccttgcgtcagcgcctggcacagcgtgaa
acgtcgccggaggatctgccgcagcagctcgacgcattgttcggcccggccaattcttcg
tcacaagctgtcatcgactggcagaaacttgcctgcgcactggcgacccgcaagggcttc
agcatcatcaccggcggccccggcaccggcaaaaccaccacggtggtgcgcctgctggcc
ttgttgcaggccccggcggtacagaatggccaaccgctgcgtatccgtctggcggcacct
accggcaaggcggcggcccgactgaccgagtccatcagccagcaggtgcagagcctggac
gtcagcgacgacgtacggcagaaaatccccagcgaagtcaccaccgtccaccgcctgctt
ggcagtcgccccggtacccggcacttccgccatcacgcaggcaacttactgccactggac
gtgctggtggttgatgaagcatccatgatcgacctggaaatgatggccaatctgctcgac
gcattaccgccgcatgcgcgcatggtgctgctcggcgacaaggaccagttggcctccgtt
gaggcgggtgccgttctgggcgatttgtgtcgcgacgccgaagaaggtttttacagccct
gaaactcaggcctggcttgaagctgtcagcggcgaagacctcagcaaaggtgccttgcgc
caaggcgatgcgcagcaccatccattggcccagcaagtggtgatgctgcgccattcgcgt
cgttttggccaaggcagcggtatcggccagttggcccgactggtcaaccagcagcaggac
caacaggcccgcgcgctgcttgcggcgggcagtcacgacgacctgtttgccctggcgttg
aagggcgaacaggatctgaagttcgaacgccttgtgctcgacgggcttggcagaggcgag
caaggtccgcagggttaccgccattacctcaacgtacttgccgccgggcggcccgccgat
gattcggccctcgacgaccattgctggactcgatgggcgcgcttggtgctcagcgccttc
gacgccttccaactgctgtgcgctgtacgcaaaggcccgtggggcgtggaaggcctgaac
cagcgcatcactcatgcgctgttcaacgcgaagctgattgaaagcgaacagcaatggtac
gaaggccgcccggtgttgatgacccataacgactatggcctgggcttgatgaacggcgac
attggcatcaccttacgcctgcccgagcgcgacggcgacggcaagcaagtgctacgtgtc
gcgttcccgcgcaacgacggcagcgatggcgtacgcttcgtcctgcccagccgcctcaac
gaggtcgagaccgtgtacgccatgaccgtacacaaatcccaaggctcggaattcgcccac
accgccctgatcctgcccgaagcgctcaaccctgtactgaccaaggagctcatctacacc
ggcatcacccgcgccaagcactggttcagcctgatcgaaccgcgccagggcatcttcgag
gaggctctgcgccgcaaggtcaaacgtctgagtggtttgatgttggggctttga
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