Pseudomonas savastanoi pv. savastanoi: PSA3335_05960
Help
Entry
PSA3335_05960 CDS
T07948
Name
(GenBank) pectate lyase
Organism
psav
Pseudomonas savastanoi pv. savastanoi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
ARD10655
UniProt:
A0ABC8B900
LinkDB
All DBs
Position
1292520..1293767
Genome browser
AA seq
415 aa
AA seq
DB search
MRLWGALLQCVSALFLMLSGAQYLEAADLPEGFAKGVTGGGAAAAVHPSTLDQLRSALCA
SYDSRGACTDETPRVIVLEHLFDFRGSLVAKGSAETTEPGCMVKQCPHGGEQLALNGPNN
FCQSRPPVMVTYDNAGLKPLKVGSNKTLIGVGKKAGIQGAGLFIGDGAHNVIVRNLTLSD
INPSVVWGGDALTLNKADGVWIDHNTFARIGRQMIVTGWGTASHVTISSNEFDGRTPYSS
TCDGHHYWVWLFLGSQDTLTLSKNYIHDASGRAPHSGGMNNAQVRAQLVNNVFQRMTYQG
AIMSRTSSSQLLVEGNDFENVAHPLFNDTDQPGTAFALFGPGSAGANDVCMSVIGRACVA
NQQQMSGDDYRPQDTSVLEAFRDYRQFLVAPVSAQEARARVPEDAGVGKVGVGLR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaggctttggggtgctcttttgcaatgcgtttctgctttgttcctgatgctgtcgggt
gcgcaatacctggaggcagcggacttgccggaaggttttgccaaaggggttacgggtggc
ggagccgccgcggcagtacacccttcaacgcttgaccagcttcggtctgcactgtgcgcg
tcttacgactcgcgcggtgcctgtaccgatgaaaccccgcgggtcattgtgctggagcac
ctgttcgactttcgcgggagtctcgttgccaaaggcagcgccgaaaccaccgaaccgggc
tgcatggtcaagcagtgtccgcatggcggcgagcagcttgctctcaatggtcccaacaac
ttctgccaatccaggccaccggtcatggtgacctacgacaatgcagggctgaagccactg
aaagtcggatcgaacaagaccctgataggcgtgggcaaaaaggccggtatccaaggtgca
ggactgttcatcggtgacggcgcgcataacgtgattgtccgtaacctgacgctttcagac
atcaacccgagtgtcgtatggggcggagatgcgctcactctgaacaaagccgatggcgtg
tggattgaccacaacaccttcgcccgtatcggcagacaaatgatcgtgacaggctggggc
actgcttcacacgtcaccatttccagcaatgagttcgatggtcgcacgccttactcgtcg
acctgcgatggccatcattactgggtctggctgttcctcggcagtcaggacacgctgacg
ctgtcaaaaaactacatacacgacgcctcgggaagagcgccgcactccggaggcatgaat
aatgcgcaagtccgcgctcaactggtcaataacgtttttcagcgcatgacctaccagggc
gcaatcatgtcgcggacttcatcctcacagttgctggtggaaggaaacgattttgaaaac
gtagctcatccactgttcaacgatacggatcagccgggtaccgcgtttgctttgtttggg
ccgggttcagctggcgcaaacgatgtatgtatgagtgttattggaagagcatgtgtggcg
aatcagcagcagatgagtggcgatgactatcgtcctcaggacacatctgtgctggaggct
ttcagggattatcggcagtttctggtggcgccggtttcggcgcaagaggccagggcgcgc
gtgccggaagacgcaggcgtggggaaggtaggtgttggtttacgatga
DBGET
integrated database retrieval system
