Pseudomonas savastanoi pv. savastanoi: PSA3335_06265
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Entry
PSA3335_06265 CDS
T07948
Name
(GenBank) signal peptide prediction
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
psav
Pseudomonas savastanoi pv. savastanoi
Pathway
psav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psav00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSA3335_06265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psav02000
]
PSA3335_06265
Transporters [BR:
psav02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PSA3335_06265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
ARD10708
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Position
1357811..1359007
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AA seq
398 aa
AA seq
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MTITLRVLGTSVTLLESLRERAEQELGIKLIYQIHDVQTAQRIAVMQPDSYDLYDQWFHN
VDFVWPARAIQPIDTRRIALWHEINDLPKQGRLRPTDQPGSGSVPSERLFVQHDGSLGSA
VTERISMLPLTHNADSFAYRPERLPDGLSPADESWGWLLDPVWGGRIALQSDAAIGALDA
ALAVQGAGLAAFKDIGNMSIEEIDVLAHVLVRKQQQGHFGAFWSDDEEAAELMLSPTIDI
QSLWSPTLVRLHRAGVKYRVAVPKEGYRGWFGGLSLSRHAKGPVLDAAYAYLNWWLSGWP
GAVMARQGYYIGNPARSRDHLSAAEWDYWYDGLPAREQLLGSDGLPLIDAGEIRDGGSYE
ERMGHIAVWNSVMNEHNYLVRRWNDILRASGKSSAKAR
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaccattaccttgcgtgtgctgggtacgtccgtgaccttgctggagtccttgcgtgag
cgggccgagcaggaactgggcatcaagctgatctatcagatccatgacgtgcagaccgcg
caacgcatcgcggtcatgcagcccgacagctacgacctttacgatcagtggtttcataac
gttgatttcgtctggcctgcgcgggccattcaacccatcgatacgcggcgcatcgcgctt
tggcacgaaatcaacgacctgcccaaacaggggcgactaagacccaccgatcaaccgggc
agcggcagtgtgcccagcgaacgtctgttcgtgcagcacgatggcagcttgggcagtgcg
gtgactgagcgcatcagtatgttgccgctgactcacaacgccgacagtttcgcctatcgc
cccgagcgtttgccggatgggctgagtcctgctgacgaaagttggggctggttgctcgac
cctgtgtggggtgggcgcatcgccttgcagagcgacgctgctatcggcgcactggatgcc
gcactggccgtgcagggcgcggggctggcggcgttcaaggacatcggcaacatgagcatc
gaagaaatcgacgtgctggcccacgtgctggtgcgtaaacagcagcaagggcattttggc
gcgttctggtcagacgacgaagaagccgccgaactgatgctcagcccgaccatcgacatt
cagagcctctggtcaccgaccctggtcaggttgcaccgcgcgggtgtgaagtaccgcgtg
gcagtgcccaaagagggttatcgcggctggttcggcgggctgtctttatcgcgccacgcc
aaaggcccggtgctggatgcagcctacgcctacctgaactggtggctgtccggctggccg
ggcgcagtgatggcgcggcaggggtattacatcggcaatccggcgcgcagtcgtgatcat
ctgagtgccgcagaatgggattactggtacgacggtctgcccgcccgcgagcaactgctc
ggcagcgacggcctgccactgatcgacgccggagagatccgcgacggcggttcctacgag
gaacgcatgggccacattgcagtgtggaactcggtcatgaacgaacacaactacctggtc
cgccgctggaacgatatcctgcgcgccagtggcaaaagcagcgccaaagcgcgttag
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