Pseudomonas savastanoi pv. savastanoi: PSA3335_06985
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Entry
PSA3335_06985 CDS
T07948
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
psav
Pseudomonas savastanoi pv. savastanoi
Brite
KEGG Orthology (KO) [BR:
psav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psav03009
]
PSA3335_06985 (rimO)
Enzymes [BR:
psav01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PSA3335_06985 (rimO)
Ribosome biogenesis [BR:
psav03009
]
Prokaryotic type
ribosomal protein modification factors
PSA3335_06985 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
CLP1_P
Matrix_Paramyxo_N
Motif
Other DBs
NCBI-ProteinID:
ARD10840
UniProt:
A0ABC8B9D7
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All DBs
Position
complement(1518363..1519706)
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AA seq
447 aa
AA seq
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MSTVTTPSAPKVGFVSLGCPKALVDSERILTQLRMEGYEVVATYEDADVVVVNTCGFIDT
AKAESLEVIGEAIKENGKVIVTGCMGVDANVIRDVHPSVLSVTGPQQYEQVVNAVHDVVP
PRKDHNPLIDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AKRLVKSGVKELLVISQDTSAYGVDVKYRTGFWDGQPVKTRMTELCQALGSMGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKILKLMKRPAFEDKTLARIKNWREQCPD
LIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANLLDAAIVPDDVK
QDRWDRFMAHQQAISAARLQMKIGKEIEVLIDEVDDRGAVGRCFFDAPEIDGNVFIGLEE
GSTVQPGDKIMCRVTDADEYDLWAEML
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgtcaccacgccgtccgccccaaaggtcggattcgtttcactgggttgcccg
aaggcactcgttgattccgaacgcatcctgacccagctgcgcatggaaggttacgaagtc
gttgcgacctacgaggatgccgacgtggtcgtggtcaatacctgcggcttcatcgacacc
gccaaggccgagtcgctggaagtgatcggcgaagcaatcaaggaaaacggcaaggtcatc
gtgaccggctgcatgggcgttgacgcaaatgtcattcgcgatgtgcaccccagcgtgctg
tcggtgaccggcccgcagcagtacgaacaagtggtcaacgcagtgcacgatgtcgtgccg
ccccgcaaggaccacaatccgctgatcgacctggtgccaccgcaaggagtcaagctgacc
ccgcgccactacgcgtatctgaaaatttccgaaggctgcaaccatagctgcagcttctgc
atcatcccgtcgatgcgcggcaagctggtcagccgtccggttggcgatgtactggatgag
gccaagcgtctggtcaaatccggcgtgaaggagctgctggttatttcccaggacaccagc
gcctatggcgttgacgtcaaataccgcaccgggttctgggacggccagccggtcaagacc
cgcatgaccgagctgtgccaggcgctgggttcgatgggcgtctgggttcgcctgcattac
gtttacccgtacccgcacgtcgacgaactgattccgctgatggcggccggcaagatcctg
ccgtacctggacatcccgttccagcacgccagcccgaaaatcctcaagctgatgaagcgg
ccagcctttgaagacaagacactggcacgcatcaagaactggcgcgagcagtgtcctgat
ctgattatccgctcgacattcatcgtcggctttcccggtgagaccgaagaagacttccag
tacctgctggactggctgaccgaagcccaactggaccgcgtcggctgcttccagtattcg
ccggttgaaggtgctcctgccaatctgctggatgcggccatcgtgccggatgacgtcaag
caggaccgctgggatcgcttcatggctcatcaacaggcaatcagcgctgcgcgcctgcaa
atgaagatcggcaaggaaatcgaagtactgatcgacgaagtcgatgatcgtggcgccgta
ggccgctgcttcttcgatgctccggaaatcgacggcaacgtgttcatcggtctggaagag
ggcagcaccgttcagccaggcgacaagatcatgtgccgcgttaccgatgctgacgaatac
gacctgtgggccgagatgctgtaa
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