Pseudomonas savastanoi pv. savastanoi: PSA3335_07350
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Entry
PSA3335_07350 CDS
T07948
Name
(GenBank) peptidase M20
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
psav
Pseudomonas savastanoi pv. savastanoi
Pathway
psav00300
Lysine biosynthesis
psav01100
Metabolic pathways
psav01120
Microbial metabolism in diverse environments
psav01230
Biosynthesis of amino acids
Module
psav_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psav00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PSA3335_07350
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psav01002
]
PSA3335_07350
Enzymes [BR:
psav01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
PSA3335_07350
Peptidases and inhibitors [BR:
psav01002
]
Metallo peptidases
Family M20
PSA3335_07350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
ARD10900
LinkDB
All DBs
Position
complement(1589349..1590512)
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AA seq
387 aa
AA seq
DB search
MLDDPIALTRALLAFQTLNPPGDEEACAAFLAEQLIRHGYRCELQRFGERRFNLVAWLEG
DGPGKPLGFTGHLDTVPLGNATWSHSPFAGEIADGRLYGRGSSDMKAGIAAFIVACQRSR
AAIQRGPGVRLLLTGGEETGCDGARALCTDAPHLLGELGALLVGEPTANYPILGHKGALW
LRCASHGLTAHGAMPEEGVNAIYLAARHIDRAQTFEVGPAHHLMRKPTLNVGTISGGLNI
NSVPDYAEFTLDLRTAPNLDHDEIRTRLAAHLGNGAELSTLIDLPGVCADPDEPWVRQVF
ARCQALHDAPLQAQTVPYFTDAAVLLPAVGHPPTLILGPGEPSMAHKVDEYCEVSKLQQC
VELYAGLIEDWANIQSTAAAQHTNPSQ
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatgacccgatagccctgacccgcgccctgctggcgttccagaccctcaaccca
ccgggcgatgaagaggcctgtgctgcctttctcgctgaacagctgatccgccacggatat
cgctgcgagctgcagcgtttcggtgagcgccgtttcaatctggtcgcctggcttgagggc
gacggccccggcaaaccgctggggttcaccggccacctggataccgtaccgctcggcaat
gccacctggagtcactcgccgtttgccggtgagattgccgacggccggctgtacgggcga
ggatccagcgacatgaaagcgggcattgctgccttcatcgtggcctgccagcgcagccgt
gccgccattcagcgcggcccgggcgttcgcttgttgctcaccggcggagaagaaaccggc
tgtgatggcgcccgcgcactgtgcacggacgctccccatttgcttggcgaactcggcgca
ctgctggtcggcgaaccgactgccaactatccgatactcgggcacaagggcgcattgtgg
ctacgctgcgccagccacggtcttacggcgcatggagcaatgccggaagaaggcgtgaat
gccatctatctggccgcccgacatatcgaccgcgcacagacctttgaggtgggcccggcc
catcaccttatgcgcaagcccaccctgaacgtcggcaccatcagtggaggcctgaacatc
aactcggtcccggactacgcagagttcaccctcgacctgcgtacagcgccgaatctggac
catgatgagatccgcacgcgattagcggcgcatctgggcaacggtgcagagttgagtacc
ctgattgatttgcctggtgtttgcgccgatcccgacgagccttgggtccgacaggttttt
gcccgctgccaggctttgcatgacgcccctttgcaggcacagacagtgccctactttacc
gatgccgctgtgctgctacccgccgtcggtcacccgcccactcttattctcggcccggga
gagccgagcatggcccacaaggtggatgagtattgtgaggtcagcaaacttcaacagtgc
gtcgagctgtatgccggtttgatcgaagactgggcaaacattcaatccactgcagcagcg
caacacactaacccctcacaataa
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