Pseudomonas savastanoi pv. savastanoi: PSA3335_10700
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Entry
PSA3335_10700 CDS
T07948
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
psav
Pseudomonas savastanoi pv. savastanoi
Pathway
psav03410
Base excision repair
psav03430
Mismatch repair
psav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSA3335_10700
03430 Mismatch repair
PSA3335_10700
03440 Homologous recombination
PSA3335_10700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psav03400
]
PSA3335_10700
DNA repair and recombination proteins [BR:
psav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PSA3335_10700
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PSA3335_10700
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PSA3335_10700
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ARD11489
UniProt:
A0ABC8BBI5
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Position
2325604..2327319
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AA seq
571 aa
AA seq
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MRIEPRLLPDTLPFLGDLPPLLTRLYAARGVACEAELDKSLTRLIPYQQLKGIDAAVDLL
VTALQEGQRMLIVGDFDADGATASTVGVLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVEV
ALQREPQLLITVDNGISSVEGVAAAKAAGLQVLVTDHHLPGHELPAADAIVNPNQPGCTF
PSKSLAGVGVIFYVLMALRARLRDTGWFESNQRAQPNLGELLDLVALGSVADVVPLDANN
RILVHQGLMRIRAGRARPGLRAILEVARRESSRITSTDLGFIIGPRLNAAGRLDDMSLGI
ECLLCDDPTLAREMAVQLDELNQDRKSIEQGMQREALAQLKDLPLESMPFGLCLFDAEWH
QGVIGILASRLKERYHRPTIAFASAAEGVLKGSARSVPGFHIRDALDAVAASHPHLISKF
GGHAMAAGLSLPEENFPAFAEAFDLEVRRQLDEQDLTGRLLSDGSLAVEEFHLELARALR
NAGPWGQHFPEPLFHGIFQLVEQRVVGERHLKMVLKTECGSVKLDGIAFGVDRDIWPNPN
IRWVELAYKLDLNEFRGNETVQLMVVHIAPR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgaaccccgtctattgcctgataccttgccgtttctcggcgacctgccgccc
ttgctcactcgtctttatgctgcaaggggcgtggcctgcgaggccgagctggacaaaagc
ctgacgcggttgatcccttatcagcaactcaagggaatcgatgctgcggtagatctgctg
gtaacggcgctgcaggagggtcagcgtatgctgattgtcggtgatttcgatgccgacggt
gcgactgccagcaccgtgggtgttctggggctgcgcctgctgggcgcggcgcacgtcgat
tatctggtgcctaaccgttttgagtacggttatggcctgacgccggaaatcgtcgaagtg
gcgttgcagcgcgagcctcagctattgatcaccgtggataacggcatttcgagcgtcgag
ggtgtggccgctgccaaggcggcaggcttgcaggtactggtcaccgaccaccatttgccg
ggtcacgagcttccggcggcagacgccatcgtcaaccccaaccagccaggctgtaccttt
cccagcaaatcgctggccggtgtcggggttattttctatgtgttgatggccttgcgtgcg
cgtttgcgggacaccggctggttcgagagcaaccagcgtgcccagcccaacctgggtgag
cttctggacctggtcgcgctgggcagcgtggccgatgtcgtgccgctcgacgccaacaac
cgcattctggtgcaccaaggcctgatgcgtattcgtgctggccgtgcccggcccgggctg
cgcgcgattcttgaggttgcacggcgtgagtcttcgcgcatcacctctactgatctgggg
tttattatcgggccacgcctgaacgcggcggggcgcctggacgatatgagcctgggcatt
gaatgcctgctctgcgacgacccgacactggcgcgagaaatggccgtgcaactggacgaa
ttgaaccaggatcgcaaatccattgagcagggcatgcagcgtgaagcgctcgcgcagctc
aaggacctgccgctggagtccatgccgttcggcctgtgcctgttcgatgccgaatggcat
cagggtgtcatcggtatcctggcctcgcgcctcaaggagcgctaccaccgacctaccatc
gcgttcgccagtgccgcggagggcgtgctcaaaggctcggctcgctcggtgccggggttt
cacattcgcgatgcgctggacgctgtggcggccagtcatccgcatctgatcagcaagttc
ggcggccacgccatggcggcaggtctctcgctgcctgaagagaatttcccggcgtttgcc
gaagcgttcgacctggaagtgcgtcgtcagctcgacgagcaggacttgaccggacgtctg
ctgtctgacggttcgctggccgtcgaggaattccatctggaactggcccgcgcactgcgc
aacgccggtccctggggacagcacttccccgagcccttgttccacggcatattccagctt
gtcgaacagcgggtggtgggcgagcgtcacttgaagatggtgctcaagaccgagtgcggc
agcgtcaagctcgatggcattgcgttcggcgtcgaccgcgacatctggcccaaccccaac
attcgctgggtcgaactggcctacaaactggacctcaacgagtttcgtggcaacgaaacc
gtgcagttgatggtggtgcacatcgcgccacgctga
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