Pseudomonas savastanoi pv. savastanoi: PSA3335_10995
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Entry
PSA3335_10995 CDS
T07948
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
psav
Pseudomonas savastanoi pv. savastanoi
Pathway
psav03030
DNA replication
psav03430
Mismatch repair
psav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSA3335_10995
03430 Mismatch repair
PSA3335_10995
03440 Homologous recombination
PSA3335_10995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psav03032
]
PSA3335_10995
03400 DNA repair and recombination proteins [BR:
psav03400
]
PSA3335_10995
Enzymes [BR:
psav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSA3335_10995
DNA replication proteins [BR:
psav03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSA3335_10995
DNA repair and recombination proteins [BR:
psav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSA3335_10995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ARD11546
UniProt:
A0ABC8BBW6
LinkDB
All DBs
Position
2395003..2398524
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRVKPLIKALTGMNMPAVAVTDQNNMCSLVKFYKAAQGSG
IKPICGVDLWLAGRDEDAALSRISLLAMNAQGYRNLTELISRGFIEGQRNGQIVIQRQWV
AQASEGVIALSAAKEGEIGMALLGGNPGEADELLREWMAVFPDRFYIEVQRTNRNNDEEH
LHAAVALAERHGAPLVATNDVRFIKQTDFEAHETRVCIGEGRALDDPRRSHNYSDQQYLK
SPEEMAELFSDLPEALENTVEIAKRCNIDVKLGTHFLPNFPIPDGMTIDEYFRKVSFDGL
EERLAVLLPKDTTEDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKSNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEYV
AEKYGRNAVSQIITFGSMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFLKVDEEAAEIWEMALKLEGIVRNVGKHAGGVVIAPTKLTDFSPIYCDEAGDGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVNEEPLDIAFIPLDDMPTYQ
LLQRAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELSYPHVDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCKTNNIDPDLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKTHY
PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNTSEFKFTVSDDGRILYGLGAI
KGVGEGPVEAITDARQNGPFKDLFDFCARVDLKRVNKRTLDGLIRSGALDRLGPYFELEP
KAYQANIDRNRSVLLAALEEAIQAAEQTARSHDSGHADLFGGLFVEADADVYANHRKTRE
LSLKDRLRGEKETLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGLIIALRVM
KNKKGDKMGFITLDDRSARIEASLFAEAFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLR
AKRVMSIEDARTNLAESLRVTVRAEALKGDRLRWLGDLCKRHRGACPITVDYTGQDARAL
LQLGEAWRIDPADSLIQALRDQFGRENVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttctttcgttcatctacgcctgcacaccgaatactcgctggttgacggtctg
gtccgggtcaaaccgttgatcaaggcgctgactggcatgaacatgcctgccgtggcggtg
accgaccagaacaacatgtgttcgctggtcaagttctacaaggccgcgcaaggctcgggt
atcaagccaatctgtggtgtcgacttgtggctggcgggcagggatgaagacgctgcgctc
agtcgcatcagcctgctggccatgaatgcccagggctatcggaacctgaccgaactgatt
tcccgtggttttatcgaaggccagcgcaacggccagatcgtcatccagcgccaatgggtc
gcgcaggccagtgaaggcgtgattgcgctttccgctgcaaaggaaggcgagatcggcatg
gcgctgctcggcggcaaccccggcgaggcggacgaactgctgcgcgaatggatggcggta
tttcccgatcgtttctatatcgaagtgcagcgcaccaatcgcaacaatgacgaagagcat
ttgcatgccgctgttgccttggccgaacgccacggtgcgccgctggttgcgaccaacgat
gtgcgtttcatcaagcagactgacttcgaagcccacgagactcgcgtttgtattggcgaa
ggccgggcgctggacgatccgcgtcgttcgcataactacagcgatcagcaatacctgaaa
agcccggaagaaatggccgagctgttcagcgacctgcccgaggcgctggaaaacaccgtc
gagatcgccaagcgctgtaacatcgacgttaagctgggcactcactttttgcccaacttc
ccgattcctgatggcatgaccatcgatgagtatttccgcaaggtctcgttcgatggtctc
gaagagcgtcttgccgtcctgttgcccaaggacaccaccgaagattacgaagccaagcgt
caggtgtatgtcgaccggctgaatttcgagctggatatcatcatccagatgggctttccc
ggctacttccttatcgtgatggacttcatccagtgggccaagagcaacggcgtaccggtg
gggccgggtcgtggttcgggtgccggatcgctggttgcctatgtgcagaagatcaccgac
ctcgacccgctggaatacgacctgctgttcgaacgcttcctgaacccggagcgggtttca
atgcccgacttcgacgtcgacttctgcatggacggccgtgatcgggtgatcgaatacgtg
gccgagaaatacggtcgcaatgcggtcagccagatcatcaccttcggttccatggccgcc
aaggcagtggtgcgtgacgtggcgcgggtgcagggcaagtcttacgggctggctgatcgt
ctgtcgaagatgatcccgttcgaagtcggcatgaccctcgaaaaggcctacgagcaggaa
gaaattcttcgcgacttcctcaaggttgatgaggaggctgcagaaatctgggagatggcg
ctcaagcttgaaggcattgtgcgtaacgtcggtaagcacgccggtggtgtggttattgcc
ccgaccaagctgaccgacttttcgccgatctattgcgacgaggccggtgacggcctggta
acccagttcgacaaggacgatgtcgaggcggcggggctggtgaagttcgacttcctcggt
ctgcgtaccctgaccatcatcgactgggcgctcaagaccatcaaccgcgaccgcgccaag
gtcaacgaagagccgctggacatcgcgttcatcccgctcgatgacatgccgacctatcag
ttgttgcagcgtgccgaaaccactgcggtgttccagctcgagtcgcgcggcatgaaagag
ctgatcaaaaagctcaagcccgactgcctggaagaccttatcgcactggtagcactgttc
cgtcccggcccgctgcaatcgggcatggtggacgacttcatcaaccgcaaacacggtcgt
gcagagctgtcctacccgcacgtcgattatcagtacgaaggcctgaagccggtactggca
ccgacctatggcatcattctgtatcaggaacaggtgatgcagatcgcccaggtcatggcc
ggttacaccctcggcggtgcggacatgctgcgtcgcgcaatgggcaagaaaaagcccgag
gaaatggccaagcagcgcggtggtttcatcgagggttgcaagaccaataacatcgacccg
gaccttgccggtaacatcttcgacctggtggaaaaattcgccggttacggcttcaacaaa
tcccactcggctgcctacggacttgtgtcgtaccagaccgcctggctgaagacccactac
ccggcgccgttcatggctgccgtgttgtcggcggatatgcacaacaccgacaaggtcgtg
accttgatcgaagaagtgcgcacgatgaagctgcgcctcgacgcgccggacgtgaacacc
tcggagttcaagttcacggtaagcgacgatggccgcattctttacgggcttggcgccatc
aaaggggtgggcgagggcccggtcgaagcgattaccgatgcgcgtcagaacgggccgttc
aaggacctgttcgatttctgcgcccgcgtcgatctcaagcgggtcaacaagcgaacgctg
gatggtctgattcgcagcggtgcgctggatcgtctcgggccgtacttcgaactggaaccc
aaggcctatcaggccaacattgatcgtaaccgctcggtgctgcttgccgcgctggaagaa
gccattcaggcggcagagcagaccgcgcgcagccacgacagtggtcacgcagacctgttt
ggcggcctgttcgttgaagcggatgccgatgtttacgccaatcatcgtaagacccgcgag
ctgagcctcaaggaccgtctgcgcggtgaaaaggaaaccctgggcctgtacctgaccggt
cacccgatcgatgaatatgaaggcgagattcgccgcttcgctcgtcagcgcatcatcgac
ctcaagcccgccagagacacccagacggtggccggcctgatcattgccttgcgcgtaatg
aagaacaagaagggcgacaagatggggttcattaccctggacgatcgctctgcacgcatt
gaagcatcactgtttgccgaagcgtttcattcggctcaatcactgctgcagaccgatgct
atggtggtggtcgaaggcgaagtcagtaatgatgacttctccggggggctgcggttgcgc
gccaagcgggtcatgagtatcgaagatgcgcgcaccaatctggccgagagcctgcgagtg
acggtacgcgccgaagcactcaagggcgaccggctgcgctggttgggtgatctgtgcaag
cgccatcgcggtgcctgtccgatcacagtggactacacggggcaggacgcccgtgcattg
ctgcaattgggagaagcatggcggattgatcccgctgacagcttgattcaagctctgcgt
gaccagttcggacgtgagaacgtctttctccagtatcgttga
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integrated database retrieval system
