Pseudomonas savastanoi pv. savastanoi: PSA3335_11850
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Entry
PSA3335_11850 CDS
T07948
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
psav
Pseudomonas savastanoi pv. savastanoi
Pathway
psav02020
Two-component system
psav02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psav00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSA3335_11850
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PSA3335_11850
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
psav02022
]
PSA3335_11850
02035 Bacterial motility proteins [BR:
psav02035
]
PSA3335_11850
Two-component system [BR:
psav02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
PSA3335_11850
Bacterial motility proteins [BR:
psav02035
]
Flagellar system
Flagellar assembly proteins
Others
PSA3335_11850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
MCM
HTH_20
AAA
HTH_30
MerR
FleQ
AAA_2
AAA_3
HTH_23
HTH_24
HTH_11
AAA_19
HTH_28
nSTAND3
AAA_22
RsiG
Sigma70_r4_2
AAA_7
ATPase
HTH_1
HTH_17
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
ARD11702
LinkDB
All DBs
Position
2585287..2586696
Genome browser
AA seq
469 aa
AA seq
DB search
MSINVLLVEDDRSLREALGETLELAGYGYQAVGSAEEALVAAEAQPFSLVISDVNMPGMD
GHQLLSLLRSRHPQLPVLLMTAHGAVDRAVDAMRQGAADYLVKPFEPKALIALVARHALG
RLEPAERDGPIAVEPASIQLLNLASRVAKSDSTVLISGESGTGKEVLARFIHQNSPRADK
PFIAINCAAIPDNMLEATLFGHEKGSFTGAIAAQAGKFEQADGGTILLDEISEMPLGLQA
KLLRVLQEREVERVGARKPIILDIRVVATTNRDLAGEVAAGRFREDLFYRLSVFPLAWQA
LRQRTADILPLAERLLAKHVNKMKHAPVRLSAEAQQCLVNYPWPGNVRELDNAVQRALIL
QQGGVIQAQDFCLSGPVTSLPAAAVVEAVPSLPVTSSPDNAGGNAESVGALGDDLRRREF
QMIIDTLRAERGRRKEAAERLGISPRTLRYKLAQMRDAGMDVEAYLFAT
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcaacgtgctgttggtcgaggacgaccgttcgctgcgcgaggcacttggggaa
accctggaattggctggctatggataccaggcggtcggctctgctgaagaggcgttggtc
gcagccgaggcgcaaccgttcagtctggtgatcagcgacgtcaacatgccgggcatggac
ggtcatcagttgctgagcctgttgcgcagtcggcatccgcaactgccggtattgctgatg
accgctcacggtgccgttgatcgcgcggtcgatgcaatgcgtcagggcgcggccgattat
ctggtcaagcctttcgagcccaaggccctgattgcattggttgcacgacatgcactgggt
cgtctggagcctgccgagcgcgacgggccgattgctgttgaacccgccagtatccagtta
ttgaacctggccagccgtgtggcgaagagcgactccactgtgctcatctccggtgagtcc
ggcacaggcaaggaagtgctggcgcgtttcattcatcaaaattctccgcgtgccgataag
ccttttattgcgatcaactgcgctgcgattccggacaatatgctggaagcgacgctgttc
ggtcatgaaaagggctcgtttaccggcgccattgccgcgcaggccggcaagttcgagcag
gctgacggcgggacaatcctgcttgacgagatttccgaaatgccactggggctgcaggcc
aaactgttgcgtgtgttgcaggagcgggaagtcgagcgcgtgggtgcgcgcaagccgatc
attctggatattcgcgttgtggctactaccaaccgcgatctggcaggggaagtggcggcg
gggcgctttcgcgaagatctgttttatcgcctgtcggtatttccactggcctggcaggcg
ctgcgtcaaaggactgccgatattctgccactggccgagcggcttctggccaagcacgtc
aataaaatgaagcacgcgccggttcgtctttctgccgaggcgcagcagtgtctggtcaac
tacccctggcctggcaatgtgcgtgagctggataacgccgtgcagcgagccttgattctg
cagcagggcggggtgatacaggcgcaggatttctgtctctccgggccggtgacaagtctt
ccagccgctgccgtggtggaggctgtgccgtctttgcctgtcacatcctcgcctgataat
gcaggtggcaatgcggagtctgtcggtgcactgggtgatgacctcaggcgtcgcgagttt
cagatgattattgacacgctgcgtgcggagcgcggtcgtcgcaaggaggccgccgagcgc
ttgggtatcagcccgcgtaccttgcgttacaagctggcgcagatgcgcgatgccgggatg
gatgtggaagcctatctgttcgctacctga
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