Pseudomonas savastanoi pv. savastanoi: PSA3335_14920
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Entry
PSA3335_14920 CDS
T07948
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
psav
Pseudomonas savastanoi pv. savastanoi
Pathway
psav03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psav00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PSA3335_14920
09124 Replication and repair
03420 Nucleotide excision repair
PSA3335_14920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psav03021
]
PSA3335_14920
03036 Chromosome and associated proteins [BR:
psav03036
]
PSA3335_14920
03400 DNA repair and recombination proteins [BR:
psav03400
]
PSA3335_14920
Enzymes [BR:
psav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PSA3335_14920
Transcription machinery [BR:
psav03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PSA3335_14920
Chromosome and associated proteins [BR:
psav03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
PSA3335_14920
DNA repair and recombination proteins [BR:
psav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PSA3335_14920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
ARD12254
LinkDB
All DBs
Position
3257829..3260156
Genome browser
AA seq
775 aa
AA seq
DB search
MTPTAPVKPDSEPALISDSPARYVVAVRALCEFTAKVGDLDLRFTPSPTAQEGIAGHRTV
ASRRGADYQAELSLSGDYRELTVRGRVDGYDAGRNQLEEVKTYRGELDAMPANHRRLHWA
QVKVYGWLLCQRLQLEQVTLALVYFNIVSEQETLIREPFSATTLQQFFEQQCTIFLGWAQ
QQMAHTQALHKTLGSLKFPHASFRTGQRVLAESVYKAVSTGCCLMAQAPTGIGKTVGTLF
PLLKAAPGQQLDKIFFLTAKTPGRRLALDALEVINHSAPELKLRVLELVARDKACEHLDK
ACNGDSCPLANGFYDRLPAARAAALESPWLNQASVREAALRHQVCPYYLSQELAHWADVV
IADYNYYFDLSALLFGLGQLNQWRVAVLVDEAHNMVERARQMYSASLDQSQLKALIQTSP
EPVKKALQRLDRQWNALHKVQPAAYQAYSAAPEKFIGSLNQCISTIGDHFNEHPQAVDGT
LQGFYLEAIGFARIAELFDEHFIFDITRREAGGKRILSRLSLRNVVPARFIRPRLTAARS
TVLFSATLNPRHYYADLLGLPVNTAWINVESPFNHDQLDVRIVSRISTRFTHRQASLAPI
VELMAEQFEARPGNYLAFFSSFDYLQQVAELMAQTHPHITLWQQARGMGESERHAFLDRF
TLSSQGIGFAVLGGAFGEGIDLPGARLIGAFIATLGLPQLNPVNEQFKQRMAALFGAGYD
YTYLYPGVQKVVQAAGRVIRSQSDRGVVMLIDDRFAEHKVRQLFPAWWRPETSTA
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
gtgaccccgaccgcccctgtaaaacccgactccgagccagccctcatcagtgactcgcct
gcacgttatgtcgtggccgtgcgcgcactgtgcgagttcaccgccaaggtcggcgatctt
gacctgcgcttcacaccatcacccacggctcaggaagggattgccggacaccgcacggtc
gcgtcgcgtcgcggtgctgactaccaggccgagctctcattgagtggtgactatcgcgag
ctgacggtaaggggcagggtggacgggtacgacgccggtcgcaatcaattggaagaagtg
aagacctatcgcggcgagctggatgcgatgcccgccaaccatcgtcgattgcactgggca
caggtgaaggtctacggctggctgctttgccagcgtctgcaacttgaacaagtgacgctg
gcactggtgtatttcaacattgtcagcgagcaggaaaccctgattcgcgagccattcagt
gcaacgacgctgcaacagttcttcgagcaacagtgcacgatattccttggctgggcgcag
caacagatggcgcatacgcaggcgctgcacaagacgctgggcagcctgaagttccctcac
gcgtcctttcgaaccgggcaacgggtgctggccgagtcggtgtacaaggcggtgagcacc
ggctgttgtctgatggctcaggcacccacgggcatcggcaagacggtgggcacgctgttt
ccattgctcaaggcggcgcccggtcagcagcttgacaagattttcttcctcaccgccaag
actcccgggcgtcggctggcactggatgcgcttgaggtcatcaatcacagtgcgccggag
ctaaagctgcgggtgttggaactggtggcgcgggacaaggcctgcgagcatctggacaag
gcttgtaacggagattcctgtccactggccaatggcttttacgatcgtctgccagcggcc
cgcgccgctgcacttgagtcgccctggctgaatcaggccagcgtgcgcgaggccgcattg
cggcatcaggtctgtccgtattacctcagccaggaactggcacactgggctgatgtagta
atcgctgattacaattattacttcgacctcagtgcgctgctgttcggcctcggccagctc
aatcagtggcgcgtggcggtgctggtcgacgaagcgcacaacatggtcgagcgggcccgg
cagatgtacagcgccagtcttgatcagagccagttgaaagccctgatccagacgtcgccc
gaacccgttaaaaaagccttgcagcgtctcgaccggcaatggaatgcgctgcacaaagtg
cagcccgctgcctatcaggcgtattcggcggcaccggaaaaattcatcggcagcctgaac
cagtgcatctcgaccatcggtgatcatttcaacgagcacccgcaggcagtggatggcacg
ttgcagggtttctatctggaagccatcggctttgcacgcatcgccgagctgttcgacgag
catttcatattcgacatcacccggcgcgaggcgggcggcaagcgcatcctgtcgcgcctc
agcctgcgtaacgtggttccagcacgcttcatccgtccgcgcctgaccgctgcgcgcagc
accgtgctgttttccgcaacgctcaacccgcggcattactatgcggacctgctcgggctg
ccggtcaacacagcgtggatcaatgtggaatcaccgtttaatcacgaccaactcgacgtg
cggattgtcagccgcatttccacccgtttcactcatcgtcaggcctcgctggcaccgatt
gtcgagctgatggcggagcagttcgaagcgcggccaggtaactacctggcgtttttcagc
agttttgattacctgcaacaagtggctgaactgatggcgcagactcatccgcacatcacc
ctctggcagcaggcgcggggcatgggcgagagtgagcgtcacgcgtttctcgaccgcttt
accctgagcagtcagggcatcggttttgccgtactgggcggtgcctttggtgagggcatc
gacttgccgggcgcacggttgatcggcgcgttcatcgccacgctggggctgccgcagctc
aacccggtcaacgagcagttcaagcagcgcatggccgcattgttcggtgctggctacgac
tacacctatctttaccccggcgtgcaaaaggtggtgcaggccgctggacgggtgatccgc
agccagagtgatcgtggcgtggtgatgctgatcgacgatcgttttgccgagcacaaggtc
aggcagctgtttccggcgtggtggcggcctgaaacgtcaacggcttag
DBGET
integrated database retrieval system
