Pseudomonas savastanoi pv. savastanoi: PSA3335_15025
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Entry
PSA3335_15025 CDS
T07948
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
psav
Pseudomonas savastanoi pv. savastanoi
Brite
KEGG Orthology (KO) [BR:
psav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psav03000
]
PSA3335_15025
Transcription factors [BR:
psav03000
]
Prokaryotic type
Helix-turn-helix
Other families
PSA3335_15025
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
GAF
AAA_5
AAA_2
AAA
PAS_8
HTH_50
Mg_chelatase
MCM
PAS_7
AAA_16
ATPase
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
ARD12270
UniProt:
A0ABC8BDC3
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All DBs
Position
3280375..3282369
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AA seq
664 aa
AA seq
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MSSQSATFSVQDLGYLTALGTVALNSGPIPELEQAWRARLSGVDERPATVRKVIWDSWGR
SIAGGVNPEDSDYRFVDPQHLAATLAANRVLIAAAAQVMRGLLAYNPRGHINLTDADGTT
LYFCGLDLTPVGTRLLESVQGTNCTGLALAEDSLVYVLAEENFGTGLRQRRMHCAAAPIR
NAQGKTLAMLTLTAEPGWFHFHTLGTVQAAAEAVSRQMALQALLEEQQTVLEVLNEGLVV
LDERGCIKALNRYARQLFRVGLDLLGSPFQRLGRSDLNEQILARIGEGLRDLDCTFELHD
FSQLSCLVSVCPLEQGGRVVSLRENRRIREITRRIIGTQARYTFETIQGRSRAIADAVHF
GRIASRSDSTTLILGESGTGKELFAQAIHNASDRNSGPFVAVNCGAIPRDLVQSELFGHV
EGAFTGSAKGGSAGKFELADGGTIFLDEIGDMSFDAQVSLLRVLQEGEVTRVGAKSSRSV
DVRIIAATHRNLSQAVAEGAFREDLYYRLNVLNLTVPPLRMRREDIALLAQHFLDRCARS
LRKSVLGLSAQALELLVAYSWPGNVRELENSIERATNLATGELVQPADLPLEIRQRSGPA
VPGRLPVPLAAHDLGTHEMHAIIAALESTRGNIRLAARQLNVSRGGLYNKMSRFGLNAAD
FRGL
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcacagtctgcgaccttcagcgtgcaagacctcggatacctcacagcattgggg
actgtggcactcaacagcggtcccatacccgaactggagcaggcctggcgggcgcgcctg
agtggcgttgacgagcgcccggcgacggtcaggaaggttatttgggattcctggggacgc
agcatcgcaggcggcgtgaacccggaagacagcgactaccggtttgtcgaccctcaacac
cttgcggctactctggcggccaatcgggttttgattgccgcagcagctcaagtgatgcgc
ggcttgcttgcctataacccgagaggccatatcaacctcaccgatgctgatggcaccaca
ctgtatttttgcgggctggatctgacgccggtaggtacgcgcttgctggagtcggtgcag
ggcaccaactgcaccgggctggccctggctgaagattccctggtgtatgtactggcagag
gaaaacttcggtacaggccttcgtcagcggcggatgcattgcgctgcggcgccaatccgc
aatgcccaaggcaagaccctggcgatgctgactctgaccgcagaacctggctggttccat
tttcatacgctcggcactgtccaggcggcagccgaggccgtctcgcggcaaatggccttg
caggcgctgctggaagaacagcaaaccgtgctcgaagtgctcaacgaaggtttggtggta
ctggacgaacgaggctgtataaaagcactcaatcgctatgcccggcagctttttcgggtc
ggcctggatttgctgggcagcccgttccagcgtctggggcgcagtgatttgaacgaacag
attctggcgcgtatcggtgaagggctgcgggacctggactgcacctttgaactgcatgat
ttcagccagttgtcctgtctggtttcggtatgcccactggagcagggcgggcgcgtggtg
tcgctgcgagaaaatcggcgcattcgggagatcacccggcgaattatcggcactcaggcc
cgttacacgttcgagaccattcagggccgttcacgggcgattgcagatgccgtgcatttt
gggcggatcgccagtcgcagcgattccaccaccttgattcttggcgaaagcggcaccggc
aaggagttgttcgcccaggcgatccataatgcgagtgaccgcaatagcgggccttttgta
gcggtcaactgtggcgcgattccccgggacctggtgcaaagcgagctgttcggccatgtc
gagggcgcattcacgggttcggctaaaggcgggtcggcgggcaagttcgaactggccgat
ggcggcacgatctttcttgatgagatcggcgacatgtccttcgacgcgcaggtcagcctt
ttacgggtgttgcaagagggcgaagtgacccgggtcggggcgaaaagctcgcgatcagtg
gatgtacgcatcattgccgccactcaccgtaacttgagtcaggcagtggccgaaggcgcc
tttcgtgaagatctgtattaccgactcaacgtgctcaacctgaccgtaccgccgctgcgt
atgcgtcgggaagacattgccttgctggcgcaacattttcttgatcgttgtgcccgttca
ttgcgcaagtcagtgctggggctttctgcgcaagccctggaattgctggtggcttatagc
tggccgggcaacgtgcgagagctggaaaacagcattgagcgcgcgaccaatctggccacg
ggtgagctcgtccagcccgccgatctgccccttgaaatcaggcagcggagcggccccgca
gtgccgggccggctgccagtgcctttggcggcccatgaccttggcacccacgaaatgcac
gcgattattgcggcgctcgaaagcacccgaggcaatattcgcctcgctgctcgacagctg
aacgtttcccgcggcgggctgtacaacaaaatgagtcgattcggcttgaacgccgccgat
tttcgagggctctga
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