Pseudomonas savastanoi pv. savastanoi: PSA3335_16550
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Entry
PSA3335_16550 CDS
T07948
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
psav
Pseudomonas savastanoi pv. savastanoi
Pathway
psav03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSA3335_16550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psav03400
]
PSA3335_16550
Enzymes [BR:
psav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PSA3335_16550
DNA repair and recombination proteins [BR:
psav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PSA3335_16550
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ARD12526
UniProt:
A0ABC8BEH9
LinkDB
All DBs
Position
3625161..3625973
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AA seq
270 aa
AA seq
DB search
MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDEQFPHAEVEALGYHVHFHGQK
GHYGVALLSRNPPLALHKGFEGDDEESQKRFIWGTCADSNGQPVTIMNGYFPQGESRDHP
TKFPAKQRFYENLQTLLESHFSNEQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSF
LPEEREWMERLKNWGLVDSFRHLYPEVVDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGL
QPRIKAAGVDYDLRGMEKPSDHAPIWLELN
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgtctcgttcaacatcaatggtctgcgcgctcgacctcatcagttggcggcg
ctgatcgacaaacaccagcctgacgtaatcggccttcaggaaaccaaggtttcggacgag
cagttcccccacgcggaagtcgaagcgctgggctatcatgtgcatttccacggtcagaaa
ggccattacggtgttgccctgctatcgcgcaatcctccgctggccctgcacaagggtttt
gaaggcgacgacgaggaatcgcagaagcgcttcatctggggcacttgtgccgacagcaat
gggcagccggtcaccatcatgaatggctactttccgcagggcgagagccgtgatcacccg
accaaatttccagccaaacagcgtttttacgagaatctgcagaccttgctggagagccat
ttcagcaacgagcagccgcttatcgtgatgggtgacgtaaacatttctccgcaggactgc
gacatcggcatcggtgccgacaacgccaagcgctggctgaagaccggcaagtgcagcttt
ctccccgaagagcgcgagtggatggaacgcttgaaaaactggggcctggtggacagcttc
cgtcatctgtaccctgaagtcgtcgaccgattcagctggtttgactatcgcagccgcggc
ttcgaagacgaacccaagcgcggcctgcgcattgacctgatcatgacctccaccggcctg
cagccacgcatcaaggcggccggggtggactacgatttgcgcggcatggaaaagccgtcg
gaccatgcgccgatctggctggaactgaactga
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