Pseudomonas savastanoi pv. savastanoi: PSA3335_20350
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Entry
PSA3335_20350 CDS
T07948
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
psav
Pseudomonas savastanoi pv. savastanoi
Brite
KEGG Orthology (KO) [BR:
psav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psav03000
]
PSA3335_20350
Transcription factors [BR:
psav03000
]
Prokaryotic type
Helix-turn-helix
Other families
PSA3335_20350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_30
HTH_7
HTH_23
Mg_chelatase
AAA_5
nSTAND6
HTH_11
HTH_20
HTH_3
HTH_22
HTH_17
HTH_10
AAA
AAA_2
DUF2089
HTH_29
Xre-like-HTH
dnstrm_HI1420
PAS_7
HTH_24
Phage_CP76
AAA_7
HTH_28
nSTAND3
HTH_36
RWP-RK
HTH_psq
AAA_16
TetR_N
MerR
HTH_AsnC-type
HTH_Tnp_1
RsmI_C
Motif
Other DBs
NCBI-ProteinID:
ARD13199
UniProt:
A0ABC8BGH5
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All DBs
Position
4473501..4475354
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AA seq
617 aa
AA seq
DB search
MSQSSASLVHDIIIQDSWRRCRDFGLSHQTRPSFGQLPGAEVSRLLERHHGLVQTTHQEV
LPVYENILSNSNCLILLADPQGQLLKSWGAQRFVESSQAQGFMAGASWSERGTGTNAIGT
ALACEQAIHIEPDEHFLKANRFMTGSASPIFDADRRIIAVLDVSSDSFLPPSHTLGMVKM
MSQSVENRLILDQFRDSHYQLIFNTGLNNLDSQWAGLLIFDESGQILCANRRADNLLGTT
PSGASIETLFRCPILQLLSETEARPFALHAFGNNRFQCLLKRPTRKPLKLHSVQPAQAPV
APRSLDLEAISLGDAKIEKAVNQAQRLLEKDIPLLIHGETGVGKEVFVKALHQASTRATQ
PLIAVNCAAIPAELVEAELFGYERGAFTGASQKGSIGLIRKANKGTLFLDEVGDMPLPVQ
ARLLRGLQERCVQPLGSSELYPVDIRLISATNRSLRDQVQTGHFRQDLYYRISGLNIELP
PLRERTDKHALIQRIWERHRDAHQRAGFSREVLELFEHHPWPGNIRQLNSVIQVALALAD
EQPISTEHLPEDFLLDMGMDEDCREPVKTQESTVRLHTTEDLSQLFQAAGGNISQLAKRL
GVSRNTLYKRLREQRIV
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaatccagcgcttcgctcgttcacgacatcatcattcaggattcatggaggcgc
tgccgggatttcggtctcagccatcagacgcgcccttcattcggccaactgccgggcgct
gaggtttccaggctgctggagcgccatcacgggctggtgcagaccacccatcaggaagtc
ctgccggtttatgaaaacattctgagcaactccaattgcctgattctgctggccgaccct
caaggccagttgctcaaatcctggggcgcgcaacgcttcgtcgagtcttctcaggcacag
ggcttcatggctggcgccagctggagcgaacggggcaccggcaccaatgccatcggcaca
gcactggcctgtgagcaggccattcacattgaaccggacgagcacttcctcaaggcgaat
cgcttcatgaccggttcagcttcaccgatcttcgatgccgatcggcggatcattgccgtg
ctggatgtatccagtgacagtttcctgcccccctcgcataccctgggtatggtcaagatg
atgagccagtcggtggaaaaccgactgatcctcgatcagttccgcgactcccactatcag
ttgatattcaatacgggcctgaacaatctcgacagccaatgggcaggcctgctgattttt
gacgaaagcggccagatcctttgcgccaatcgacgcgctgacaatttgttggggacgacg
ccgtccggtgccagtattgaaacgttgttcagatgcccgatcctgcaactgctcagcgag
acagaagcgcggccgtttgcgctgcacgcgtttggcaacaatcgctttcaatgtctgctc
aagcgtccgacccgcaagccgctgaagctgcacagcgtccaaccggctcaggcacctgtc
gcgccgcggagcctggatctggaggcgatcagcctgggtgatgcaaaaatcgagaaagca
gtgaatcaggcgcagcggctgctggaaaaagacatcccgctgctgatccacggggaaacc
ggggtcggcaaggaagtgtttgtcaaagccctgcatcaagccagtacccgcgccactcag
ccgctgatcgctgtcaactgcgcggctatcccggccgaactggtcgaggccgagctattt
ggctatgaaaggggggcgttcaccggtgccagtcaaaaaggcagcattggcctgattcgc
aaagccaacaaaggcacgctgtttctggatgaagtcggtgacatgcccctgccggtacag
gcgcgattgctgcgtgggcttcaagagcgctgcgttcagccgttgggcagcagtgaatta
tatccggtagacatacgcctgatttcagccaccaatcgcagcctgcgcgatcaggttcag
acggggcactttcgccaggacctttattatcgaatcagtgggctcaacatcgagttgccg
ccgttgcgcgagcgcaccgacaaacatgcactcatccagcgtatctgggagcggcatcgc
gacgctcatcaacgggcagggttttccagagaggttctcgagctattcgaacatcacccg
tggccgggcaacattcgtcagctcaacagcgtgattcaggtggcgcttgctttggcagat
gaacagccgatcagtaccgagcacctgccggaggattttctgctggatatgggcatggat
gaggactgccgagagccggtgaaaactcaggaatccactgtgcgccttcacacgacagaa
gacctgagccaactgtttcaagcggcaggcggaaatatttcacagctggcaaaacgtctg
ggggtaagccgcaacacgctgtacaagcggttgcgggaacagcggattgtctag
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