Pseudomonas savastanoi pv. savastanoi: PSA3335_21755
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Entry
PSA3335_21755 CDS
T07948
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
psav
Pseudomonas savastanoi pv. savastanoi
Brite
KEGG Orthology (KO) [BR:
psav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psav03400
]
PSA3335_21755
DNA repair and recombination proteins [BR:
psav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSA3335_21755
Archaeal homologous recombinant proteins
PSA3335_21755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_29
AAA_21
SMC_N
nSTAND3
ABC_tran
MMR_HSR1
AAA_22
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ARD13445
LinkDB
All DBs
Position
4762304..4765948
Genome browser
AA seq
1214 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR
LSNIGQSKVPDIDGDITTSDPRTLLRRGTGSGYAEVDFIGIDQRRYRARWETNRARDNAT
KKLQASRQTLTDLDSEQVLSNQSKREFEQLIEQRLGLNFEQFTRAVMLAQSEFSAFLKAD
DKERSELLEKLTNTAIYSQLGRRAYSKSKEAEEALKTLTAQASNIVPLAPELLAELEQRL
NDAQQQLKAHQAQQRQLEIKQQWLIELHRLRDEHLAAQEAITRTQQAWDDQSGARQTLGQ
LERLGPQRHRFTRRVTLNAQLNPLAEQIRQHQQQQASLQDQQQQLETRRTQAHASLLAAQ
QTHSNAKPLLQQAFDTQNTLNHLAQELAKVSDLHQQTGQLCTEGQASLHILLDQQQQVSQ
RLERIAEQLEHSSELAPLAQAWSAWRDRLKSLTLIANRLKHGQSELPALQQRASTADQQL
TEQRSALELLYREADCEVDAVTEQVQILGSLLQDNRKQQRAFEDLARLWASQQDVDRQLA
DLAQQQQSAQQQREQLNSEGIRVRDELTVAEQTLTVTRQLLERQRLARSASVEELRVQLQ
DDQPCPVCGSIEHPWHQPEALLESLTQHDDNEQASAQKAVDQLTEQRNQLREQVGGVIAR
QKELLRQHEQLTLRHQTLAPDLESHPLAAQLLDHDAGKRDSWLSQQLNNLSEVITRDEQR
QEALLTLQKDATRLQQQLQAATEASQTAASHVAEQLKQLDVDRQRLEEELSAFTPLVSPH
VLEGLRSDASATVMQLEQQVTQRLDQLEQQHEEQQEQSERQQKIEKHQIEQQTRLHRQTE
LAQEVARLGEQQQASQQALTGLLGEHATAEHWQQALENAIEQARQTESSAAEALQQIQSQ
LIQLAAELKSAQQQQQSLQQELAELDVQISEWRGQHPELDDTALDTLLTYDDAHVEQLRL
QLNATDKALEQAKVLLQERDQRLQQHQAQHSDLSDSTQLAAALQQAHEQSALGEQQCADL
RAELSEDQRRRNANSELQARINDANDEYLRWARLASLIGSAEGDKFRKIAQAYNLDLLVH
HANAQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVGVISHVQEMHERIPVQIKV
RRQGNGLSTIELGN
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatccttgccattcgcctgaaaaaccttgcctcgctggccgggccgtttgaaatc
gatttcactgccgagccgctggccagcgccggtctgttcgccattaccggcccgaccggc
gcaggtaaaagcaccctgctcgacgccttgtgcctggcgctgttcggagcgattccgcgg
ctgagtaatatcggccagtccaaggtcccggacatcgacggcgacatcaccaccagcgac
ccgcgcaccctgctgcggcgtggcacgggcagcggttacgcagaagtggactttatcggc
atcgatcagcgccgttatcgcgcccgctgggaaaccaaccgcgcacgcgacaacgcgacc
aaaaagctgcaggccagccgccagaccctgaccgacctggacagcgaacaggtgctcagc
aaccagagcaagcgtgaattcgagcaactgatcgagcagcgtctggggctcaacttcgag
cagttcacccgtgccgtgatgcttgcccagagcgagttcagcgccttcctcaaggccgac
gacaaggaacgcagcgaactgctggagaagctgaccaataccgccatctacagccagctc
gggcggcgcgcttacagcaagagcaaagaggccgaggaagcgcttaaaaccctcactgct
caagccagcaacatcgtcccgctggctccggagctgctggccgaactggagcaacgcctc
aacgatgcgcagcagcagctcaaggcgcaccaggcacagcaacggcaactggaaatcaaa
cagcagtggctgatcgagctgcaccgcctgcgcgacgaacatcttgccgctcaggaagcg
atcacccgtactcaacaggcctgggacgaccagagcggagcacgtcagaccctcggccaa
ctggaacgcctgggcccgcagcgccaccgtttcacgcgtcgggtcacgctgaacgcccag
ctcaacccgctggcggaacaaattcgtcagcatcagcaacagcaggcttcgctgcaagat
cagcagcaacaactggagacccgccgcacccaggcgcacgccagtctgctggcggcccag
caaacccacagcaacgccaaaccgctgttgcagcaggcttttgacacacagaacacgctg
aaccacctggcccaggaactggccaaggtgtctgacctgcatcagcaaaccggacagctt
tgtactgagggtcaggccagcctgcacattctgctcgaccagcagcaacaggtttcgcag
cgccttgaacgtattgccgagcaactggagcacagcagcgaactggccccgctggctcag
gcctggagcgcctggcgcgaccgcctgaaatccctcacgctgatcgccaaccgcctcaag
cacgggcagagtgaactgcctgcactgcagcaacgtgccagcacggccgatcaacagttg
accgagcaacgcagcgcgctggaattgctgtaccgcgaagccgattgcgaagtggatgcg
gtgactgaacaggtacagattctcggcagcctgctgcaggacaatcgcaagcagcaacgc
gcattcgaagacctggcccgtctgtgggccagccagcaggacgtagaccgacaactggcc
gatctggcgcagcaacagcaaagcgctcagcagcaacgcgaacagctcaacagcgaaggc
attcgcgttcgtgatgaactgaccgtcgccgaacagaccctgaccgttacccggcaactg
ctggaacgtcaacgcctggcccgcagcgccagcgttgaagaattgcgcgtccagttgcag
gacgaccagccctgcccggtctgtggcagcatcgaacacccttggcatcagccggaagct
ttgctggaaagcctcacgcaacatgatgacaacgagcaggccagcgcgcagaaggcggtg
gaccaactgaccgaacagcgcaaccaattgcgcgagcaggttggcggcgtgatcgctcgc
cagaaagagctgctgcgtcagcacgaacagctcaccctgcgccatcaaacccttgcaccg
gacctggaatctcatcccctcgcggctcaattgctcgaccacgacgcaggcaagcgtgac
agctggttgagccagcaattgaataacctgagcgaagtcatcacccgtgacgagcaacgc
caggaagcgttgctgaccctgcagaaagacgccacccgcttgcagcagcaacttcaggca
gccacagaagccagtcagaccgcggcgagccatgttgccgagcagctcaagcagctggac
gtcgacaggcagcggctggaagaagaactgagcgcattcacgccgctggtctcgccacac
gtgcttgaggggctgcgcagcgatgcatcggcaacggtgatgcagcttgagcagcaggtg
actcagcgtctggatcaacttgagcagcaacacgaagagcagcaggagcagagcgagcgc
cagcagaagatcgaaaagcatcaaatcgagcagcagactcgcctgcaccgccagaccgaa
ctggcgcaggaagtcgcccggctaggcgagcagcaacaggccagccagcaggcactgacc
ggcttgctgggcgagcatgcgactgccgagcactggcaacaggcgctggaaaacgccatc
gagcaagccaggcaaaccgaaagctcggccgccgaggctctgcagcagattcaaagccag
ttgatccagctggctgccgaactcaagtccgcccagcaacaacagcaatccttgcagcag
gaactggctgaacttgatgtgcagatcagcgagtggcgcggccagcatcccgagctggac
gataccgcgctcgacacgctgctgacttacgatgacgcgcatgtcgagcaactgcgtctg
caactgaacgctaccgacaaagcgctggagcaggcaaaagtattgctgcaggagcgcgat
cagcgcctgcaacagcatcaggcgcaacacagcgaccttagcgacagcacgcaactggcg
gcagcgctgcaacaggcccatgaacagtccgcgctcggcgagcagcaatgcgccgacctg
cgcgccgaactcagcgaagatcagcgccgtcgcaacgccaacagcgagttgcaggcgcgc
atcaacgatgccaatgacgaatacctgcgctgggcacgcctggcatcgctgatcggctcg
gccgaaggcgacaaattccgcaagatcgcccaagcctacaaccttgacctgctggtccac
catgccaatgcgcagctccggcaactggtgcgccgctaccgcctgaaacgcggcggcagc
atgctcggcctgctggtcatggacaccgaaatgggcgacgaactacgctcggttcactcg
ctgtcgggtggcgaaaccttcctggtctcgctggcgttggcgctgggactggcgtcgatg
gcctccagcacgctgcgtatcgaatcgctgttcatcgacgagggcttcggcagcctcgac
ccggaatcgctgcaactggcgatggacgcactggacggcttgcaggcacagggtcgcaag
gtcggcgtgatctcccacgtacaggaaatgcatgaacggattccggtgcagatcaaagtg
cgtcgccaggggaatgggttgagcacaatcgagttgggtaactga
DBGET
integrated database retrieval system
