Pseudomonas savastanoi pv. savastanoi: PSA3335_22205
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Entry
PSA3335_22205 CDS
T07948
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
psav
Pseudomonas savastanoi pv. savastanoi
Brite
KEGG Orthology (KO) [BR:
psav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psav03032
]
PSA3335_22205
03036 Chromosome and associated proteins [BR:
psav03036
]
PSA3335_22205
03400 DNA repair and recombination proteins [BR:
psav03400
]
PSA3335_22205
DNA replication proteins [BR:
psav03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PSA3335_22205
Chromosome and associated proteins [BR:
psav03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
PSA3335_22205
DNA repair and recombination proteins [BR:
psav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
PSA3335_22205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
ARD13519
UniProt:
A0ABC8BID5
LinkDB
All DBs
Position
complement(4849071..4849367)
Genome browser
AA seq
98 aa
AA seq
DB search
MTKSELIERIVTHQGLLSSKDVELAIKTMLEQMSQCLATGDRIEIRGFGSFSLHYRAPRV
GRNPKTGQSVSLDGKFVPHFKPGKELRDRVNEDEEEGF
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtcggagttgatcgaacgaattgtcacccatcaagggctgctctcatccaag
gatgtcgagctggccatcaagaccatgcttgaacaaatgtcccagtgcctggcgaccggt
gaccgaatcgaaattcggggttttggcagcttttcactgcattaccgtgcaccgcgagta
gggcgcaacccgaagaccggccagtcggttagtctcgacggcaagtttgtcccgcatttc
aaaccgggcaaagagttgcgggatcgggtcaatgaggatgaagaagagggcttttga
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