Pseudomonas savastanoi pv. savastanoi: PSA3335_23215
Help
Entry
PSA3335_23215 CDS
T07948
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psav
Pseudomonas savastanoi pv. savastanoi
Pathway
psav00260
Glycine, serine and threonine metabolism
psav00460
Cyanoamino acid metabolism
psav00630
Glyoxylate and dicarboxylate metabolism
psav00670
One carbon pool by folate
psav00680
Methane metabolism
psav01100
Metabolic pathways
psav01110
Biosynthesis of secondary metabolites
psav01120
Microbial metabolism in diverse environments
psav01200
Carbon metabolism
psav01230
Biosynthesis of amino acids
psav01240
Biosynthesis of cofactors
psav04981
Folate transport and metabolism
Module
psav_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
psav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PSA3335_23215 (glyA)
09102 Energy metabolism
00680 Methane metabolism
PSA3335_23215 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PSA3335_23215 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PSA3335_23215 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PSA3335_23215 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PSA3335_23215 (glyA)
Enzymes [BR:
psav01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PSA3335_23215 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
ARD13698
LinkDB
All DBs
Position
5068806..5070059
Genome browser
AA seq
417 aa
AA seq
DB search
MFSRDLTIAKYDADLFAAMEQEALRQEEHIELIASENYTSPAVMEAQGSALTNKYAEGYP
GKRYYGGCEYVDVIEQLAIDRAKELFGADYANVQPHAGSQANSAVYLALLQGGDTILGMS
LAHGGHLTHGASVSSSGKLYNAVQYGIDANGMIDYDEVERLAVEHKPKMIVAGFSAYSQI
LDFPRFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARANAEIEKKLNSAVFPGSQGGPLEHVIAAKAVCFKEALQPEFKTYQQQVVKNAKAMAGV
FIERGFDVVSGGTENHLFLLSLIKQDISGKDADAALGRAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECKELAGWICDILADLNNEAVIEAVREKVKAICAKLPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgactatcgccaagtacgacgccgatctgtttgccgccatggag
caagaagctctgcgtcaggaagaacacatcgagctgattgcctcggaaaactacaccagt
ccggccgtcatggaagctcagggctcggccctgaccaacaagtacgccgaaggctatcca
ggcaagcgctactacggtggttgcgagtacgtcgacgttatcgaacaactggccatcgac
cgcgccaaggagctgttcggcgctgattacgccaacgtccagccacatgcgggttcgcaa
gccaactcggcggtctacctggccctgctgcaaggcggcgacaccattctgggcatgagc
ctggctcacggtggtcacctgacccacggcgccagtgtttcgtcctcgggcaagctgtac
aacgccgttcagtacggtatcgatgccaacggcatgatcgactacgacgaagtcgagcgc
ctggctgtcgagcacaagccaaaaatgatcgtcgccggtttctctgcctactcgcagatc
ctcgacttcccgcgcttccgtgcaatcgctgacaaggtcggtgcctacctgttcgtcgac
atggctcacgtagccggtctggtcgccgcaggcgtctacccgaacccggtgccattcgcc
gacgtcgtgaccaccaccacacacaagaccctgcgcggtccacgtggcggcctgatcctg
gcgcgcgccaacgccgaaatcgagaagaagctgaactccgcggtattccctggctctcag
ggcggtccgctggagcacgtcatcgcagccaaggccgtgtgcttcaaggaagcgctgcag
cctgagttcaagacctaccagcaacaagtggtcaagaacgccaaggcaatggccggtgtg
ttcatcgagcgcggcttcgacgtggtttccggtggtactgaaaaccacctgttcctgctg
tcgctgatcaagcaggacatctccggtaaagacgccgacgccgccctgggtcgcgccttc
atcaccgtcaacaagaactccgtaccgaacgacccacgctccccgttcgtcacctccggc
ctgcgcttcggcaccccggcagtgaccactcgcggcttcaaggaagctgagtgcaaggaa
ctcgcgggctggatctgcgacatcctggctgacctgaacaacgaagccgtgatcgaagcc
gttcgcgagaaggtcaaggccatctgcgcgaagctgccagtttacggcgcttga
DBGET
integrated database retrieval system