Pseudoalteromonas sp. A25: PA25_00040
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Entry
PA25_00040 CDS
T07990
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
psaz
Pseudoalteromonas sp. A25
Brite
KEGG Orthology (KO) [BR:
psaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psaz03032
]
PA25_00040 (gyrB)
03400 DNA repair and recombination proteins [BR:
psaz03400
]
PA25_00040 (gyrB)
Enzymes [BR:
psaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PA25_00040 (gyrB)
DNA replication proteins [BR:
psaz03032
]
Prokaryotic type
DNA Topoisomerases
PA25_00040 (gyrB)
DNA repair and recombination proteins [BR:
psaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PA25_00040 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BBN80019
UniProt:
A0A5H2XSI9
LinkDB
All DBs
Position
1:3622..6045
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AA seq
807 aa
AA seq
DB search
MSENYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCDDIF
VTIHTDGSVSVRDNGRGIPTSIHEEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKLQLTIRREGKVHQQKYTMGVPDAPLAEIGESDTTGTELRFWPSGETFSDIN
FHYDILAKRLRELSFLNSGVSIILNDEREDNKQDHFKYEGGIQAFVEYLNRKKTPVHQSV
FHFTSEREDGISVEVSMQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAALTRTLNTYMEK
EGFNKKAKTTSNATGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQAMAEKL
TEFLLEHPADAKTVVGKIIDAARAREAARKAREMTRRKGAMDLAGLPGKLADCQERDPAL
SELYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCG
IGRDEYDPEKLRYHRIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGYVYIAQPPLYKV
KKGKQEQYIKDDAALTVYLTSLALNGAALYPSEGAAAIEGEALAEIVNDYQNTVKIIERL
NRKYPASVTNRLIYQAELTESDLSDQAKVKAWTESLVADLVDCDEDATIFSSEVSFDDER
NMYYPVVKIRQHGVDKAYTLDYNFITSKDYVRIAQTGKNISKILGKDGYMQRGEKTYPVD
NFVDALEWLIGESKRGLYTQRYKGLGEMNPSQLWETTMDPSARRMLRVTIEDAIAADQLF
ATLMGDQVEPRREFIETNALRVVNLDV
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaattacgattcgtccagtattaaagtactgaaaggattggatgcagtaaga
aagcgtccaggaatgtatataggggatactgatgatgggacaggtctacatcatatggtg
ttcgaggttgtagataactcgatcgatgaggcgttagcgggccactgtgatgatattttt
gtcaccatccataccgacggttctgtttctgttcgcgataatggtcgaggcattcccact
tcaattcatgaagaagaaggggtatctgcagcggaagttatcatgaccgttttacacgcg
ggtggtaagtttgacgacaactcttataaagtatctggtggtctacacggcgtaggtgta
tcagttgtaaatgcactttctgaaaaactacaattaacaattcgccgcgaaggcaaggtg
catcagcaaaaatacaccatgggcgtgcctgatgcgccattggcagaaattggtgagtct
gatacaacaggtactgaacttcgcttctggccaagcggtgaaactttctctgatattaac
ttccactacgacattcttgctaagcgtttgcgtgagctttcatttttgaactctggtgtt
agcattattttaaacgatgagcgcgaagataataaacaggatcactttaaatatgaaggt
ggtattcaagcatttgtcgaatacttaaaccgtaaaaaaacaccggttcatcaaagtgtt
tttcattttacgtctgagcgtgaagacggcattagtgttgaagtatcaatgcagtggaat
gacggtttccaggaaaatatttattgttttaccaataatattccacaacgcgatggtggt
actcacttagcgggcttccgtgctgcgttaacgcgtacgctcaatacctatatggaaaaa
gaaggctttaataaaaaagcaaaaaccacgagcaatgcgactggtgatgatgcgcgtgag
gggttaacagcagtagtcagtgttaaggttcctgatccaaaattctcatctcaaaccaaa
gataagttagtatcgagcgaagttaagtctgctgtagagcaagcaatggcagaaaagcta
accgagtttttacttgagcatccggctgatgcaaaaaccgttgttggtaaaattatcgat
gcggctcgtgctcgtgaagctgcgagaaaagcgcgagaaatgactcgtcgtaaaggtgct
atggatttagcgggcttacccggtaaacttgctgattgccaagaacgtgacccagcactt
tctgaactatacatagtggagggtgactctgcgggtggttctgcaaagcaaggtcgtaac
cgtaaaaaccaagcgattttgcctctaaagggtaaaattctaaacgttgaaaaagcacgt
tttgataagatgctgtcttcacaagaagttgcgaccctgatcacggcgttaggctgtggt
attggtcgtgatgagtatgaccctgaaaagttgcgctatcaccgaattatcatcatgacc
gatgccgacgtggatggttctcacattcgtacgctattattgacgttcttctatcgtcaa
atgccagaaattattgagcgtggttacgtatatatcgcacagccaccgctttacaaagtg
aagaaaggcaaacaagaacagtacatcaaagatgatgctgcgttaaccgtgtatttaact
tctttggctttaaacggcgctgcactttatccgagtgaaggcgctgctgctattgaagga
gaagcccttgctgaaatcgttaatgactaccaaaacacggttaaaatcatagaaaggctc
aatcgcaagtacccagcttcagtgaccaatcgcttgatatatcaagctgaactaacagag
tcagacttgtctgatcaggcgaaagttaaagcttggactgagtcattagttgcagactta
gttgactgtgatgaagatgcgacaatttttagctctgaagttagctttgatgatgagcgt
aatatgtattacccagtggtgaaaattcgccagcacggggttgataaagcctatacactt
gattacaactttatcacttcaaaagactatgtacgtatcgctcaaacaggtaaaaatata
agcaagatactgggcaaagatggctatatgcagcgtggtgaaaaaacctacccagttgat
aactttgtagatgcactagagtggttgattggcgagtcaaaacgcggcttgtatacacaa
cgttataaaggattgggagagatgaacccaagccagctttgggaaaccaccatggaccca
agcgctcgtcgtatgctacgtgtaaccattgaagatgctatcgccgcagaccaactattt
gctacgctaatgggtgaccaagtagagcctcgtcgagagtttattgaaactaacgcatta
cgcgtagtaaacctagacgtttaa
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