Pseudoalteromonas sp. A25: PA25_00850
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Entry
PA25_00850 CDS
T07990
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
psaz
Pseudoalteromonas sp. A25
Brite
KEGG Orthology (KO) [BR:
psaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psaz03009
]
PA25_00850 (dbpA)
Enzymes [BR:
psaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PA25_00850 (dbpA)
Ribosome biogenesis [BR:
psaz03009
]
Prokaryotic type
rRNA helicases
PA25_00850 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
P-loop_SecA
Helicase_C_2
AAA_19
PRAI
Motif
Other DBs
NCBI-ProteinID:
BBN80100
UniProt:
A0A5H2XWX9
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All DBs
Position
1:97913..99298
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AA seq
461 aa
AA seq
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MNTAAFNTLPLATEFLNTLADLGFKSMTPVQAQSLPVVLSGKDVIAQAKTGSGKTVAFSL
GVLSRLNVNRYRVQGLVLCPTRELAEQVAAEMRKLARGIHNIKILTLCGGVPIGPQIGSL
EHGAHIIVGTPGRVEDHLFKGTLNLTEVSSLVLDEADQMLDMGFADVLDNIVSYLPQQRQ
TLLFSATYQKRIEEIAERVMQNPQMVKVEEQVVNTSIKQLFFKLDNNKLRFNTLRLLLLQ
HKPQSCVVFCNTKVETQKVCDELKASGFNVVALHGDLEQREREQTLIRFANKSASVLVAT
DVAARGLDIDDMDMVINYHLAHDSQTHVHRVGRTGRGGKKGLACSIYGESEAFKVAQIGD
VYDRDFEPSPMPSLNLLDKPPYKPDMITLQIDGGKKQKIRPGDIVGSLTGEQGIAFAQIG
KINVLDNSAYVAVAREAAKPAFRKLSEGKLKGRKFRVRRIN
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaatacagctgcatttaataccttacctttggcgacagagtttttaaatacgttggcc
gatttaggctttaaaagcatgacacctgttcaggcgcagagtttacccgtggtgttgtca
ggtaaagatgttatcgcacaggcgaaaacaggctcaggtaaaacagtggcttttagtctt
ggtgtgttgtctcgactgaatgtgaatcgttatcgagtacaggggctggtgttatgccca
acaagagagctggcagagcaagtcgcggctgaaatgcgaaagttagcccgaggcattcac
aatatcaaaatattaacgttgtgtggcggcgtgccaatcggtccgcaaattggatcactt
gaacacggcgcgcatattatagtggggacgccagggcgggtagaggatcacctgttcaaa
gggacattaaatttaactgaagtctccagtttagtgctagatgaagcagatcaaatgttg
gatatgggctttgcagatgtgcttgataatatcgtatcgtatttgccacaacagcgtcag
accttgttattcagtgcaacttatcaaaagcggattgaagagatagccgagcgtgtgatg
caaaatccacaaatggtcaaagttgaagagcaagtggtgaataccagtattaagcagttg
ttttttaaattggataacaataagttacgcttcaatactttacgcttattattattacaa
cataaacctcagagctgcgtagtattttgtaataccaaagttgaaacgcaaaaagtatgt
gacgagttgaaggccagtggcttcaacgttgtggctctacatggtgatttggaacagcgg
gaaagagagcagaccttaattcgcttcgctaataaaagtgcctccgtactcgttgccacc
gatgtagctgcacgtggtttggatattgatgatatggacatggtgatcaattaccaccta
gcgcacgattcacaaacccatgtgcatcgtgttgggcgaactggccgagggggcaaaaaa
gggttggcatgttcgatttatggagagagcgaagcgtttaaagtggctcaaattggagat
gtatatgaccgtgattttgaaccaagcccgatgccatcactgaatctattggataagcca
ccgtataagccagatatgataacgctgcaaattgatggtggtaaaaaacaaaagatacgc
cccggtgatattgtcggtagcttaacaggagagcaaggtattgcctttgcgcaaattgga
aaaattaatgtgctagataatagtgcttatgtcgcagtcgcgcgtgaagccgccaagcct
gcttttcgtaagttaagtgaaggaaagttaaaaggtcgaaagtttcgcgttcgccgcatt
aactaa
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