Pseudoalteromonas sp. A25: PA25_02650
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Entry
PA25_02650 CDS
T07990
Name
(GenBank) hypothetical protein
KO
K18765
RNase E specificity factor CsrD
Organism
psaz
Pseudoalteromonas sp. A25
Brite
KEGG Orthology (KO) [BR:
psaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psaz03019
]
PA25_02650
Messenger RNA biogenesis [BR:
psaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PA25_02650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
MRP-S24
VWA
Motif
Other DBs
NCBI-ProteinID:
BBN80280
UniProt:
A0A5H2XXE6
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All DBs
Position
1:303563..305179
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AA seq
538 aa
AA seq
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MQLFFKSLNWRMVAVGLAVIVALNILLLHLLHLQIHQRAEAVVQRVAKLPTELRTETNIA
AIAQQFKFEYVPDDAPLPEEASQFSAAGISLNLVHPAPYQKHAYIILFFNILFFGLLVFV
YRWWQVYRVRPRRFLSDNKLDSHDNSILSTVDPKAADSSLFKVFLLIRWTIKLEPGLDEK
SHFSVAIHKHLPSSMKCSVKYLNSGALAVTFENIAWGDVIELGKKLHEVMFRTLRSLRGD
LSRKQIKVGGCFYQNEAEQANVYQLARAALEIANNNVWQHVHMMPLDKTHENAMQNSEDD
FVRCIKNGQFVLFFQPLFGFEQQDIIQSEVLLRVRHAQLGLIAAKQFIPQLHSKDNLETL
DKTILSKAISILSKEPHKSDVSINLHIENWVDIDFIHWLIAQIRDTNQIKKLTFEVCADD
YYKYHQQINVQQLFFTGVNVALIIDHVESPLIVNILRENQLISAVKLGFGLVHKVHLSTQ
QQKTIKQIVYQAKRLKVAVYAVGVESQAELDCLKSLGVDGAQGYYFAELLQQLELVRY
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
gtgcagttattttttaaatcactcaactggcgtatggttgcagtgggcttagcggttata
gttgctttaaatatcttattgctacatttattgcatttacagatacatcagcgtgcagag
gctgttgtgcaaagagtggctaagttgccaactgagctcagaactgaaacgaacattgcc
gcgattgcgcagcagttcaagtttgagtatgtacctgatgatgcaccactacctgaagag
gcctctcagttctcggcggcgggtatctccctcaatttggtgcaccctgcaccttatcaa
aagcatgcttatatcattttatttttcaatatattattttttgggctgttggtttttgtc
tatcgctggtggcaagtttatcgcgttagacctaggcgttttttgtctgataataaatta
gacagtcacgataactcaattttgagcacggttgatccaaaagctgccgatagcagcttg
ttcaaggtatttttattgatcaggtggaccatcaagcttgagcctgggcttgatgaaaaa
agtcatttcagtgtcgcgattcataagcatttaccaagttcgatgaaatgttcagtaaag
tatttaaattctggcgccttggctgttactttcgagaatatagcttggggggatgtgata
gaactagggaaaaagcttcatgaggtcatgtttcgcacgcttcgttcacttaggggggat
ctgtcccgtaagcagatcaaagtaggtggctgtttttatcaaaatgaagctgaacaagcg
aatgtgtaccaattagcgagggcagcgctagaaatagctaataataatgtgtggcaacat
gtccatatgatgccattagataaaacgcatgaaaatgccatgcaaaatagtgaagatgac
tttgttcgctgtatcaaaaatgggcagtttgtcttgtttttccagcccttatttgggttt
gagcagcaagatattattcaaagtgaggtgttgttgagggtaaggcatgcgcaactaggg
ctcatcgctgctaagcagtttattcctcaattgcacagcaaagacaacctagaaacactt
gataagaccattttgagtaaagctataagcattctttcgaaagagcctcacaaatcggat
gtgagcattaaccttcatatcgaaaactgggtagacattgattttatacattggttgatt
gcgcaaattagagatacaaaccagatcaaaaagctgacctttgaagtatgtgctgatgat
tattataagtatcatcagcaaattaatgttcagcagctgttttttacaggcgtcaatgta
gcgttaattattgatcatgttgaatcaccgctgattgtaaatattttacgcgaaaaccaa
ttgatctcggctgtaaagttagggtttggacttgtgcacaaagtccatctaagtacacaa
caacaaaaaaccattaaacaaatagtttatcaagcaaaaaggttaaaggtggcggtttat
gctgttggtgttgagagccaagcagaattagattgtttgaagtctttgggggtagatggc
gctcagggttattattttgctgagttgctccagcaattagagctagtgagatattaa
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