Pseudoalteromonas sp. A25: PA25_03400
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Entry
PA25_03400 CDS
T07990
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
psaz
Pseudoalteromonas sp. A25
Pathway
psaz00470
D-Amino acid metabolism
psaz00550
Peptidoglycan biosynthesis
psaz01100
Metabolic pathways
psaz01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
psaz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PA25_03400 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PA25_03400 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PA25_03400 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psaz01011
]
PA25_03400 (ddlB)
Enzymes [BR:
psaz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
PA25_03400 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
psaz01011
]
Precursor biosynthesis
Amino acid ligase
PA25_03400 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
CPSase_L_D2
ATP-grasp_3
ATP-grasp
GARS_A
TTL
ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID:
BBN80355
LinkDB
All DBs
Position
1:386154..387062
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AA seq
302 aa
AA seq
DB search
MNQFGKVAVLLGGSSAEREVSLKSGEAVLNALQSVGVDAIGFDPAQRNLWELKNLAVERV
FIALHGRGGEDGTIQGALEYMGIPYTGSGVLGSALAMDKVRCKHLFQSAKLSTAPYAVVD
ANIGFNAQAIISEFGKVMVKPSHEGSSIGMAQASSAQELTDALNNAFKFDDQVLVEQWIT
GREFTVAMLAEDALPVIEMKTPRGFYDYEAKYQVNSTQYFCPADISDAYTSQLQVMAKHA
FELVGAKGWGRVDAMQDENGQFYLLEVNTVPGMTEKSLVPMAAKAKGISFEQLVVRILEQ
TL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagttcggtaaagtagcggtattattaggcggcagttcggctgaacgagaagtt
tcgcttaaatcgggagaggcggttttaaatgcgctacaaagtgtaggggttgatgctatt
ggattcgacccagcacaaagaaacttatgggaattgaaaaatttagcagttgagcgcgtg
tttattgctttacatggtcgcggtggtgaagatggcaccatacagggcgcgcttgagtat
atgggtattccatacactggtagtggcgtacttgggagtgcattggctatggataaagtg
cgttgcaagcacctgtttcaatcggccaagctcagtacagcgccatatgctgtagtcgat
gccaacattggttttaatgcgcaagccatcatcagtgagtttggcaaagtgatggtcaag
ccttcccatgaagggtcaagtattggtatggcacaagcaagttctgcgcaagagctaact
gatgcgcttaataacgcatttaaatttgatgaccaagtattagtagagcagtggatcacg
gggcgagagtttactgtggccatgctagcagaggacgcattgcctgtaattgaaatgaaa
actccgcgaggattttatgattacgaggcaaaatatcaggttaatagtacgcagtatttt
tgccctgctgatatttcagatgcttatacatcacaactacaagtaatggctaaacatgca
tttgaattagtgggtgccaaaggttgggggcgtgtggatgctatgcaagacgaaaatggg
cagttttatttgcttgaagtgaatactgtaccaggaatgaccgaaaagtctttggtgccc
atggctgctaaggcgaaaggtataagttttgaacaattagttgttcgcattttggagcaa
accctttaa
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